Return to main results Retrieve Phyre Job Id

Job DescriptionP13979
Confidence20.28%DateThu Jan 5 11:33:52 GMT 2012
Rank14Aligned Residues37
% Identity8%Templatec2r76A_
PDB info PDB header:lipoproteinChain: A: PDB Molecule:rare lipoprotein b; PDBTitle: crystal structure of the rare lipoprotein b (so_1173) from shewanella2 oneidensis, northeast structural genomics consortium target sor91a
Resolution2.60 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   61........70.........80.........90........
Predicted Secondary structure 











Query SS confidence 





































Query Sequence  TSDKDMSGLQGKIADAVKAKGYQVVTSPDKAYYWIQAN
Query Conservation 

  
   
   
   
   




  
  
 
 

 
Alig confidence 






























.





Template Conservation   
 
  
 
 
 

  
   

 

      .  
 
 
Template Sequence  SSSDEYKELTRLVRERLRLNNVKIVDAANDV. PVLRLI
Template Known Secondary structure  S
TTSTT

SS
SSS.
Template Predicted Secondary structure 












.
Template SS confidence 





































   41........50.........60.........70. ......
 
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions