Job Description P13979 Confidence 12.24% Date Thu Jan 5 11:33:52 GMT 2012 Rank 22 Aligned Residues 38 % Identity 32% Template c1uwvA_ PDB info PDB header:transferase Chain: A: PDB Molecule:23s rrna (uracil-5-)-methyltransferase ruma; PDBTitle: crystal structure of ruma, the iron-sulfur cluster2 containing e. coli 23s ribosomal rna 5-methyluridine3 methyltransferase Resolution 1.95 Å

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		42	.	.	.	.	.	.	.																50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.
Predicted Secondary structure										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		E	T	I	W	L	E	P	A	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S	E	R	T	V	F	L	Q	I	K	N	T	S	D	K	D	M	S	G	L	Q	G	K	I	A	D	A	V	K	A	K	G	Y	Q	V	V	T
Query Conservation										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.										.	.	.	.	.	.										.
Template Conservation																																		.	.	.	.	.	.										.
Template Sequence		D	K	V	L	L	D	P	A	R	A	G	A	A	G	V	X	Q	Q	I	I	K	L	E	P	I	R	I	V	Y	V	S	C	.	.	.	.	.	.	N	P	A	T	L	A	R	D	S	.	E	A	L	L	K	A	G	Y	T	I	A	R
Template Known Secondary structure		S								T	T															S							S	.	.	.	.	.	.										.						T	T
Template Predicted Secondary structure																																		.	.	.	.	.	.										.
Template SS confidence
		358	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.							390	.	.	.	.	.	.	.	.		.	400	.	.	.	.	.	.	.	.	.	410

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions