Job Description P37177 Confidence 100.00% Date Thu Jan 5 11:54:54 GMT 2012 Rank 10 Aligned Residues 271 % Identity 27% Template d1kbla1 SCOP info TIM beta/alpha-barrel Phosphoenolpyruvate/pyruvate domain Pyruvate phosphate dikinase, C-terminal domain Resolution 1.94

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		433	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.																					.	480	.	.	.	.	.	.	.	.	.	490	.	.
Predicted Secondary structure																																																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		E	R	I	K	V	M	L	N	A	G	L	S	P	E	H	E	E	K	L	G	S	R	I	D	G	I	G	L	Y	R	T	E	I	P	F	M	L	Q	S	G	F	P	S	E	E	E	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	Q	V	A	Q	Y	Q	G	M	L	Q	M	F	N	D
Query Conservation																																																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																																																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		R	T	L	K	V	R	T	N	A	D	T	P	E	D	T	L	N	A	V	K	L	G	A	E	G	I	G	L	C	R	T	E	H	M	F	F	E	A	D	R	I	M	K	I	R	K	M	I	L	S	D	S	V	E	A	R	E	E	A	L	N	E	L	I	P	F	Q	K	G	D	F	K	A	M	Y	K	A	L	E	G
Template Known Secondary structure				S								S										T	T			S							T					S															S										T	T																T	T
Template Predicted Secondary structure
Template SS confidence
		532	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.
		493	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.																								.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		K	P	V	T	L	R	T	L	D	V	G	A	D	K	Q	L	P	Y	M	P	I	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	E	E	N	P	C	L	G	W	R	G	I	R	I	T	L	D	Q	P	E	I	F	L	I	Q	V	R	A	M	L	R	A	N	A	A	T
Query Conservation																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																		.
Template Conservation																																																																																.
Template Sequence		R	P	M	T	V	R	Y	L	D	P	P	L	H	E	F	V	P	H	T	E	E	E	Q	A	E	L	A	K	N	M	G	L	T	L	A	E	V	K	A	K	V	D	E	L	H	E	F	N	P	M	M	G	H	R	G	C	R	L	A	V	T	Y	P	E	I	A	K	M	Q	T	R	A	V	M	E	A	A	I	.	E
Template Known Secondary structure											S		G	G	G	G	S			S												T																S		G	G	G	S	S		T																								.
Template Predicted Secondary structure																																																																																.
Template SS confidence
		612	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.	.	.	.	.	.	.	.	670	.	.	.	.	.	.	.	.	.	680	.	.	.	.	.	.	.	.	.		690
		550	.									.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.
Predicted Secondary structure				.	.	.	.	.	.	.	.
Query SS confidence				.	.	.	.	.	.	.	.
Query Sequence		G	N	.	.	.	.	.	.	.	.	L	N	I	L	L	P	M	V	T	S	L	D	E	V	D	E	A	R	R	L	I	E	R	A	G	R	E	V	E	E	M	I	G	Y	E	I	P	K	P	R	I	G	I	M	L	E	V	P	S	M	V	F	M	L	P	H	L	A	K	R	V	D	F	I	S	V	G	T	N	D
Query Conservation				.	.	.	.	.	.	.	.
Alig confidence				.	.	.	.	.	.	.	.																																			.
Template Conservation																																														.
Template Sequence		V	K	E	E	T	G	I	D	I	V	P	E	I	M	I	P	L	V	G	E	K	K	E	L	K	F	V	K	D	V	V	V	E	V	A	E	Q	V	K	K	E	K	G	S	.	D	M	Q	Y	H	I	G	T	M	I	E	I	P	R	A	A	L	T	A	D	A	I	A	E	E	A	E	F	F	S	F	G	T	N	D
Template Known Secondary structure																		S			S																							T		.												S						T					T	T	T		S
Template Predicted Secondary structure																																														.
Template SS confidence
		691	.	.	.	.	.	.	.	.	700	.	.	.	.	.	.	.	.	.	710	.	.	.	.	.	.	.	.	.	720	.	.	.	.	.	.	.	.	.	730	.	.	.	.		.	.	.	.	.	740	.	.	.	.	.	.	.	.	.	750	.	.	.	.	.	.	.	.	.	760	.	.	.	.	.	.	.	.	.
		622	.	.	.	.	.	.	.	630	.	.	.	.														.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660	.			.	.	.	.	.	.	.	.	670	.	.	.	.	.	.	.	.	.	680	.	.	.	.	.	.
Predicted Secondary structure															.	.	.	.	.	.	.	.	.	.	.	.	.																												.	.
Query SS confidence															.	.	.	.	.	.	.	.	.	.	.	.	.																												.	.
Query Sequence		L	T	Q	Y	I	L	A	V	D	R	N	N	T	.	.	.	.	.	.	.	.	.	.	.	.	.	R	V	A	N	I	Y	D	S	L	H	P	A	M	L	R	A	L	A	M	I	A	R	E	A	E	I	H	.	.	G	I	D	L	R	L	C	G	E	M	A	G	D	P	M	C	V	A	I	L	I	G	L	G	Y
Query Conservation															.	.	.	.	.	.	.	.	.	.	.	.	.																												.	.
Alig confidence															.	.	.	.	.	.	.	.	.	.	.	.	.																												.	.
Template Conservation
Template Sequence		L	T	Q	M	T	F	G	F	S	R	D	D	A	G	K	F	L	D	S	Y	Y	K	A	K	I	Y	E	S	D	P	F	A	R	L	D	Q	T	G	V	G	Q	L	V	E	M	A	V	K	K	G	R	Q	T	R	P	G	L	K	C	G	I	C	G	E	H	G	G	D	P	S	S	V	E	F	C	H	K	V	G	L
Template Known Secondary structure								T																T	T	S		S	S		T	T	T	S			T	T	T																	T	T							S	G	G	G	G	S										T	T
Template Predicted Secondary structure
Template SS confidence
		770	.	.	.	.	.	.	.	.	.	780	.	.	.	.	.	.	.	.	.	790	.	.	.	.	.	.	.	.	.	800	.	.	.	.	.	.	.	.	.	810	.	.	.	.	.	.	.	.	.	820	.	.	.	.	.	.	.	.	.	830	.	.	.	.	.	.	.	.	.	840	.	.	.	.	.	.	.	.	.
		687	.	.	690	.	.	.	.	.	.	.	.	.	700	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	H	L	S	M	N	G	R	S	V	A	R	A	K	Y	L	L	R	R
Query Conservation
Alig confidence
Template Conservation
Template Sequence		N	Y	V	S	C	S	P	F	R	V	P	I	A	R	L	A	A	A	Q
Template Known Secondary structure		S						G	G	G
Template Predicted Secondary structure
Template SS confidence
		850	.	.	.	.	.	.	.	.	.	860	.	.	.	.	.	.	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions