Job Description P37177 Confidence 42.99% Date Thu Jan 5 11:54:54 GMT 2012 Rank 174 Aligned Residues 144 % Identity 11% Template c3mq0A_ PDB info PDB header:transcription repressor Chain: A: PDB Molecule:transcriptional repressor of the blcabc operon; PDBTitle: crystal structure of agobacterium tumefaciens repressor blcr Resolution 1.79 Å

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		4	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	L	R	E	I	V	E	K	V	A	S	A	P	R	L	N	E	A	L	N	I	L	V	T	D	I	C	L	A	M	D	T	E	V	C	S	V	Y	L	A	D	H	D	R	R	C	Y	Y	L	M	A	T	R	G	L	K	K	P	R	G	R	T	V	T	L	A	F	D	E	G	I	V	G	L	V	G	R	L	A	E
Query Conservation
Alig confidence																																			.	.	.																								.	.																			.
Template Conservation																																			.	.	.																								.	.																			.
Template Sequence		H	S	L	R	W	A	N	G	F	L	S	H	L	D	I	V	S	T	F	N	D	H	L	A	Q	R	H	D	L	D	P	Y	T	.	.	.	V	T	L	T	V	R	E	G	G	E	V	V	Y	I	G	C	R	N	H	T	F	R	I	.	.	G	M	R	L	P	A	P	F	T	A	T	G	K	I	L	L	S	D	.
Template Known Secondary structure													T													T		G	G	G	T	T	S		.	.	.								T	T														T	.	.	T					T	T	T	S								T	T	.
Template Predicted Secondary structure																																			.	.	.																								.	.																			.
Template SS confidence
		88	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120				.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.			.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.
		84	.	.	.	.	.	90	.	.	.	.	.	.																				.	.	.	100	.	.	.	.	.	.	.											.	.	110	.	.	.	.	.	.		.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.
Predicted Secondary structure															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.												.	.	.	.	.	.	.	.	.	.										.
Query SS confidence															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.												.	.	.	.	.	.	.	.	.	.										.
Query Sequence		P	I	N	L	A	D	A	Q	K	H	P	S	F	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	K	Y	I	P	S	V	K	E	E	R	F	.	.	.	.	.	.	.	.	.	.	R	A	F	L	G	V	P	I	I	.	Q	R	R	Q	L	L	G	V	L	V	V	Q	Q	R	E	L	R
Query Conservation															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.												.	.	.	.	.	.	.	.	.	.										.
Alig confidence		.	.	.											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.												.	.	.	.	.	.	.	.	.	.										.
Template Conservation		.	.	.
Template Sequence		.	.	.	L	G	P	G	E	L	R	M	L	F	S	Q	F	P	Q	P	L	T	S	R	S	V	A	G	L	S	Q	L	E	E	E	L	A	L	T	R	A	R	G	Y	S	I	D	D	G	Q	I	R	E	G	M	L	C	I	G	A	A	I	R	D	Y	S	G	A	A	S	A	G	I	A	I	S	L	I	R	S	E
Template Known Secondary structure		.	.	.	S										S	S					S	S	T	T	S			S															T	S					S	S	S	S	T	T											T	T	S												T	T	S
Template Predicted Secondary structure		.	.	.
Template SS confidence
					168	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.
		134	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	Y	D	E	S	E	E	S	F	L	V	T	L	A	T	Q	M	A	A	I	L	S	Q	S
Query Conservation
Alig confidence		.
Template Conservation		.
Template Sequence		.	A	S	D	E	K	I	A	Y	L	G	E	E	L	R	T	T	A	N	A	L	S	E	K
Template Known Secondary structure		.			T	T
Template Predicted Secondary structure		.
Template SS confidence
			245	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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