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Job DescriptionP37177
Confidence99.72%DateThu Jan 5 11:54:54 GMT 2012
Rank43Aligned Residues166
% Identity13%Templatec3ibjB_
PDB info PDB header:hydrolaseChain: B: PDB Molecule:cgmp-dependent 3',5'-cyclic phosphodiesterase; PDBTitle: x-ray structure of pde2a
Resolution3.02 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   2.......10.........20.........30.........40.........50.........60.........70.........80.
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Query Sequence  LTRLREIVEKVASAPRLNEALNILVTDICLAMDTEVCSVYLADHDRRCYYLMATRGLKKPRGRTVTLAFDEGIVGLVGRL
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Template Sequence  DRKILQLCGEL. YDLDASSLQLKVLQYLQQETRASRCCLLLVSEDNLQLSCKVIGDKVLG. . EEVSFPLT. GCLGQVVED
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   227..230....... ..240.........250.........260.........270.........280..... ....290... ......300..
 
   82.......90.........100.........110...... ...120.........130. ........140.........150........
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Query Sequence  AEPINLADAQKHPSFKYIPSVKEERFRAFLGVPII. . QRRQLLGVLVVQQRE. LRQYDESEESFLVTLATQMAAILSQSQ
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Template Sequence  KKSIQLKDLTSEDVQ. QLQSMLGCELQAMLCVPVISRATDQVVALACAFNKLEGDLFTDEDEHVIQHCFHYTSTVLTSTL
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   303......310....... ..320.........330.........340.........350.........360.........370.........380.
 
   159160.........170..
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Query Sequence  LTALFGQYRQTRIR
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Template Sequence  AFQKEQKLKCECQA
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   382.......390.....
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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