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Job DescriptionP37177
Confidence62.29%DateThu Jan 5 11:54:54 GMT 2012
Rank149Aligned Residues215
% Identity16%Templatec3gr7A_
PDB info PDB header:oxidoreductaseChain: A: PDB Molecule:nadph dehydrogenase; PDBTitle: structure of oye from geobacillus kaustophilus, hexagonal2 crystal form
Resolution2.30 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


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Query Sequence  GIGLYRTEIPFMLQSGFPSE. . . . . . . EEQVAQYQGMLQMF. . NDKPVTLRTLDVGADKQLPYMPI. SEENPCLGWRGIR
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Template Sequence  QVGLIIVEATGVTPQGRISERDLGIWSDDHIAGLRELVGLVKEHGAAIGIQLAHAGRKSQVPGEIIAPSAVPFDDSSPTP
Template Known Secondary structure  T
SSSGGG
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   52.......60.........70.........80.........90.........100.........110.........120.........130.
 
   527..530.. .......540...... ...550..... ....560.... .....570.........580..
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Query Sequence  ITLDQP. . . EIFLIQVRAMLRAN. AATGNLNIL. . . . . . . . . . . LPMVTSLDE. . . . . . . . . VDEARRLIERAGREVEEM
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Template Sequence  KEMTKADIEETVQAFQNGARRAKEAGFDVIEIHAAHGYLINEFLSPLSNRRQDEYGGSPENRYRFLGEVIDAVREVW. . .
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   132.......140.........150.........160.........170.........180.........190.........200........
 
   583......590.........600 .........610. ........620.........630.........640.........650.
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Query Sequence  IGYEIPKPRIGIMLEVPS. . . . . . . . . . MVFMLPHLAKR. VDFISVGTNDLTQYILAVDRNNTRVANIYDSLHPAMLRAL
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Template Sequence  . . . . . . DGPLFVRISASDYHPDGLTAKDYVPYAKRMKEQGVDLVDVSSGAIVP. . . . . . . . . . . . . ARMNVYPGYQVPFA
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   209210.........220.........230.........240.........250..... ....260.........
 
   652.......660.........670.........680..... ....690.......
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Query Sequence  AMIAREAEIHGIDLRLCGEMAGDPMCVAILIGLG. YRHLSMNGRSVA
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Template Sequence  ELIRREA. . . DIPTGAVGLIT. SGWQAEEILQNGRADLVFLGRELLR
Template Known Secondary structure  T...T

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Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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