Job Description P37177 Confidence 99.37% Date Thu Jan 5 11:54:54 GMT 2012 Rank 61 Aligned Residues 136 % Identity 18% Template c3e98B_ PDB info PDB header:unknown function Chain: B: PDB Molecule:gaf domain of unknown function; PDBTitle: crystal structure of a gaf domain containing protein that belongs to2 pfam duf484 family (pa5279) from pseudomonas aeruginosa at 2.43 a3 resolution Resolution 2.43 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80
Predicted Secondary structure
Query SS confidence
Query Sequence		M	L	T	R	L	R	E	I	V	E	K	V	A	S	A	P	R	L	N	E	A	L	N	I	L	V	T	D	I	C	L	A	M	D	T	E	V	C	S	V	Y	L	A	D	H	D	R	R	C	Y	Y	L	M	A	T	R	G	L	K	K	P	R	G	R	T	V	T	L	A	F	D	E	G	I	V	G	L	V	G	R
Query Conservation
Alig confidence																																																														.	.	.	.	.	.	.
Template Conservation																																																														.	.	.	.	.	.	.
Template Sequence		L	F	D	K	T	R	R	L	V	L	D	L	L	D	A	T	S	L	E	D	V	V	S	T	V	E	D	S	L	R	H	E	F	Q	V	P	Y	V	S	L	I	L	F	S	D	S	R	S	V	S	S	A	E	A	H	Q	A	I	G	G	.	.	.	.	.	.	.	L	L	S	G	K	T	V	C	G	V	L	R	P
Template Known Secondary structure															T			S															T	S			S																							T	T	.	.	.	.	.	.	.	S									S
Template Predicted Secondary structure																																																														.	.	.	.	.	.	.
Template SS confidence
		82	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.								.	.	.	.	.	.	.	.	150	.	.	.	.
		81	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.		.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.
Predicted Secondary structure																																																												.
Query SS confidence																																																												.
Query Sequence		L	A	E	P	I	N	L	A	D	A	Q	K	H	P	S	F	K	Y	I	P	S	V	K	E	E	R	F	R	A	F	L	G	V	P	I	I	Q	R	R	Q	L	L	G	V	L	V	V	Q	Q	R	E	L	R	Q	Y	D	E	S	.	E	E	S	F	L	V	T	L	A	T	Q	M	A	A	I	L	S	Q
Query Conservation																																																												.
Alig confidence																.	.	.	.	.	.	.	.	.	.	.	.											.																						.
Template Conservation																.	.	.	.	.	.	.	.	.	.	.	.											.
Template Sequence		H	E	L	A	F	L	F	G	E	S	D	R	D	E	.	.	.	.	.	.	.	.	.	.	.	.	I	G	S	A	A	V	V	S	L	S	.	F	Q	G	L	H	G	V	L	A	I	G	S	P	D	P	Q	H	Y	K	S	S	L	G	T	L	F	L	G	Y	V	A	E	V	L	A	R	V	L	P	R
Template Known Secondary structure														T	T	.	.	.	.	.	.	.	.	.	.	.	.		S									.	S	S	S										S	S	T	T	T	T	S	S	T	T	T	T														G	G	G
Template Predicted Secondary structure																.	.	.	.	.	.	.	.	.	.	.	.											.
Template SS confidence
		161	.	.	.	.	.	.	.	.	170	.	.	.	.													.	.	.	.	.	180	.	.	.	.		.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions