Job Description P37177 Confidence 98.21% Date Thu Jan 5 11:54:54 GMT 2012 Rank 76 Aligned Residues 326 % Identity 14% Template c3cuzA_ PDB info PDB header:transferase Chain: A: PDB Molecule:malate synthase a; PDBTitle: atomic resolution structures of escherichia coli and2 bacillis anthracis malate synthase a: comparison with3 isoform g and implications for structure based drug design Resolution 1.04 Å

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		399	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.																								.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.
Predicted Secondary structure																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		P	V	L	L	Q	E	Y	Q	R	L	I	S	E	E	I	E	L	S	R	L	A	E	D	D	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	V	N	L	P	A	Q	L	K	S	G	E	R	I	K	V	M	L	N	A	G	L	S	P	E	H	E	E	K	L	G	S	R	I
Query Conservation																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.										.									.
Template Conservation																																																										.									.
Template Sequence		T	E	L	V	T	H	F	T	P	Q	R	N	K	L	L	A	A	R	I	Q	Q	Q	Q	D	I	D	N	G	T	L	P	D	F	I	S	E	T	A	S	I	R	D	A	D	W	K	I	R	G	I	P	A	D	L	E	D	.	R	R	V	E	I	T	G	P	.	V	E	R	K	M	V	I	N	A	L	N	A	N	V
Template Known Secondary structure																												T	T							S	T	T					T	S					S				G	G	G	S		.		S							.											T	S	S	S
Template Predicted Secondary structure																																																										.									.
Template SS confidence
		34	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.		90	.	.	.	.	.	.	.		.	.	100	.	.	.	.	.	.	.	.	.	110	.
		456	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.								.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.
Predicted Secondary structure																																								.	.	.	.	.	.	.
Query SS confidence																																								.	.	.	.	.	.	.
Query Sequence		D	G	I	G	L	Y	R	T	E	I	P	F	M	L	Q	S	G	F	P	S	E	E	E	Q	V	A	Q	Y	Q	G	M	L	Q	M	F	N	D	K	.	.	.	.	.	.	.	P	V	T	L	R	T	L	D	V	G	A	D	K	Q	L	P	Y	M	P	I	S	E	E	N	P	C	L	G	W	R	G	I	R	I	T
Query Conservation																																								.	.	.	.	.	.	.
Alig confidence								.	.	.	.	.	.																											.	.	.	.	.	.	.
Template Conservation								.	.	.	.	.	.
Template Sequence		K	V	F	M	A	D	.	.	.	.	.	.	F	E	D	S	L	A	P	D	W	N	K	V	I	D	G	Q	I	N	L	R	D	A	V	N	G	T	I	S	Y	T	N	E	A	G	K	I	Y	Q	L	K	P	N	P	A	V	L	I	C	R	V	R	G	L	H	L	P	E	K	H	V	T	W	R	G	E	A	I	P
Template Known Secondary structure		S						.	.	.	.	.	.	S	S	T	T																				T	T							T	T	S							S	S											T	T									T	T
Template Predicted Secondary structure								.	.	.	.	.	.
Template SS confidence
		112	.	.	.	.	.							.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.
		529	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	D	Q	P	E	I	F	L	I	Q	V	R	A	M	L	R	A	N	A	A	T	G	N	L	N	I	L	L	P	M	V	T	S	L	D	E	V	D	E	A	R	R	L	I	E	R	A	G	R	E	V	E	E	M	I	G	Y	E	I	P	K	P	R	I	G	I	M	L	E	V	P	S	M	V	F	M	L	P	H	L
Query Conservation
Alig confidence																																																					.	.	.	.
Template Conservation																																																					.	.	.	.
Template Sequence		G	S	L	F	D	F	A	L	Y	F	F	H	N	Y	Q	A	L	L	A	K	G	S	G	P	Y	F	Y	L	P	K	T	Q	S	W	Q	E	A	A	W	W	S	E	V	F	S	Y	A	E	D	R	F	.	.	.	.	N	L	P	R	G	T	I	K	A	T	L	L	I	E	T	L	P	A	V	F	Q	M	D	E	I
Template Known Secondary structure																					T	T																														T	.	.	.	.	T			T	T		S								S					T	S
Template Predicted Secondary structure																																																					.	.	.	.
Template SS confidence
		186	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.					.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.
		609	610	.					.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630	.	.	.	.	.	.	.	.	.	640	.	.						.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.	.	.	.	.	.								.	.	670	.	.
Predicted Secondary structure					.	.	.	.																																.	.	.	.	.																										.	.	.	.	.	.	.
Query SS confidence					.	.	.	.																																.	.	.	.	.																										.	.	.	.	.	.	.
Query Sequence		A	K	R	.	.	.	.	V	D	F	I	S	V	G	T	N	D	L	T	Q	Y	I	L	A	V	D	R	N	N	T	R	V	A	N	I	Y	D	S	.	.	.	.	.	L	H	P	A	M	L	R	A	L	A	M	I	A	R	E	A	E	I	H	G	I	D	L	R	L	.	.	.	.	.	.	.	C	G	E	M	A
Query Conservation					.	.	.	.																																.	.	.	.	.																										.	.	.	.	.	.	.
Alig confidence					.	.	.	.																									.							.	.	.	.	.																										.	.	.	.	.	.	.
Template Conservation																																	.
Template Sequence		L	H	A	L	R	D	H	I	V	G	L	N	C	G	R	W	D	Y	I	F	S	Y	I	K	T	L	K	N	Y	P	D	.	R	V	L	P	D	R	Q	A	V	T	M	D	K	P	F	L	N	A	Y	S	R	L	L	I	K	T	C	H	K	R	G	A	F	A	M	G	G	M	A	A	F	I	P	S	K	D	E	E
Template Known Secondary structure					T	T	T	T								S											T	T	T		G	G	.	G					G	G	G			T	T	S																	T	T										B				S	S	G	G
Template Predicted Secondary structure																																	.
Template SS confidence
		262	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.		.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340
		673	.	.	.	.	.	.	680	.	.	.								.	.	.	.		.	.	690	.	.	.	.	.	.	.	.	.	700	.	.	.	.	.	.																																.	.	.	710	.	.	.
Predicted Secondary structure													.	.	.	.	.	.	.					.																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence													.	.	.	.	.	.	.					.																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		G	D	P	M	C	V	A	I	L	I	G	.	.	.	.	.	.	.	L	G	Y	R	.	H	L	S	M	N	G	R	S	V	A	R	A	K	Y	L	L	R	R	I	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	D	Y	A	E	A	E	N
Query Conservation													.	.	.	.	.	.	.					.																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence													.	.	.	.	.	.	.					.																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		H	N	N	Q	V	L	N	K	V	K	A	D	K	S	L	E	A	N	N	G	H	D	G	T	W	I	A	H	P	G	L	A	D	T	A	M	A	V	F	N	D	I	L	G	S	R	K	N	Q	L	E	V	M	R	E	Q	D	A	P	I	T	A	D	Q	L	L	A	P	C	D	G	E	R	T	E	E	G	M	R	A
Template Known Secondary structure		G																			T		S					S	S	G	G	G													T	T		S			T	T				T	T	S
Template Predicted Secondary structure
Template SS confidence
		341	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420
		714	.	.	.	.	.	720	.	.	.	.	.	.	.	.	.	730	.	.	.	.	.	.	.	.	.	740	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	A	Q	R	S	L	E	A	Q	L	A	T	E	V	R	H	Q	V	A	A	F	M	E	R	R	G	M	G	G	L	I	R	G	G	L
Query Conservation
Alig confidence									.	.	.	.	.	.	.	.	.							.	.
Template Conservation									.	.	.	.	.	.	.	.	.							.	.
Template Sequence		N	I	R	V	A	V	Q	.	.	.	.	.	.	.	.	.	Y	I	E	A	W	I	.	.	S	G	N	G	C	V	P	I	Y	G	L
Template Known Secondary structure									.	.	.	.	.	.	.	.	.							.	.	T	T			S				T	T
Template Predicted Secondary structure									.	.	.	.	.	.	.	.	.							.	.
Template SS confidence
		421	.	.	.	.	.	.										.	.	430	.	.	.			.	.	.	.	.	.	440	.	.	.	.