Job Description P37177 Confidence 97.44% Date Thu Jan 5 11:54:54 GMT 2012 Rank 84 Aligned Residues 220 % Identity 14% Template c3cuxA_ PDB info PDB header:transferase Chain: A: PDB Molecule:malate synthase; PDBTitle: atomic resolution structures of escherichia coli and2 bacillis anthracis malate synthase a: comparison with3 isoform g and implications for structure based drug design Resolution 1.70 Å

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		421	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.
Predicted Secondary structure																																																																										.	.	.	.	.	.	.	.
Query SS confidence																																																																										.	.	.	.	.	.	.	.
Query Sequence		D	D	V	N	L	P	A	Q	L	K	S	G	E	R	I	K	V	M	L	N	A	G	L	S	P	E	H	E	E	K	L	G	S	R	I	D	G	I	G	L	Y	R	T	E	I	P	F	M	L	Q	S	G	F	P	S	E	E	E	Q	V	A	Q	Y	Q	G	M	L	Q	M	F	N	D	.	.	.	.	.	.	.	.
Query Conservation																																																																										.	.	.	.	.	.	.	.
Alig confidence													.									.																					.	.	.	.	.	.																										.	.	.	.	.	.	.	.
Template Conservation													.									.																					.	.	.	.	.	.
Template Sequence		T	I	A	K	L	P	K	D	L	E	D	.	R	R	V	E	I	T	G	P	.	V	D	R	K	M	V	I	N	A	L	N	S	G	A	H	L	F	M	A	D	.	.	.	.	.	.	F	E	D	S	N	S	P	T	W	E	N	A	I	E	G	Q	I	N	L	R	D	A	V	K	G	T	I	S	H	K	N	E	N
Template Known Secondary structure								G	G	G	S		.		S							.	S										T	S	S		S						.	.	.	.	.	.	S	S	T	T	S																				T							T	T
Template Predicted Secondary structure													.									.																					.	.	.	.	.	.
Template SS confidence
		76	.	.	.	80	.	.	.	.	.	.		.	.	.	90	.	.	.	.		.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.							.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.
												493	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	K	P	V	T	L	R	T	L	D	V	G	A	D	K	Q	L	P	Y	M	P	I	S	E	E	N	P	C	L	G	W	R	G	I	R	I	T	L	D	Q	P	E	I	F	L	I	Q	V	R	A	M	L	R	A	N	A	A	T	G	N	L	N	I	L	L	P	M	V	T	S	L
Query Conservation		.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.																								.	.	.	.	.	.	.	.	.																						.							.
Template Conservation																																			.	.	.	.	.	.	.	.	.																						.							.
Template Sequence		G	K	E	Y	R	L	N	S	K	T	A	V	L	I	V	R	P	R	G	W	H	L	E	E	K	H	M	Q	V	D	G	K	N	.	.	.	.	.	.	.	.	.	M	S	G	S	L	V	D	F	G	L	Y	F	F	H	N	A	K	A	L	L	E	.	K	G	S	G	P	Y	.	F	Y	L	P	K	M	E	S	Y
Template Known Secondary structure		S							S	S											T	T									T	T			.	.	.	.	.	.	.	.	.																						.	T	T					.								S
Template Predicted Secondary structure																																			.	.	.	.	.	.	.	.	.																						.							.
Template SS confidence
		148	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180										.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.		.	.	.	.	.	.		.	.	210	.	.	.	.	.	.
		563	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.					610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																	.	.	.	.
Query SS confidence																																																	.	.	.	.
Query Sequence		D	E	V	D	E	A	R	R	L	I	E	R	A	G	R	E	V	E	E	M	I	G	Y	E	I	P	K	P	R	I	G	I	M	L	E	V	P	S	M	V	F	M	L	P	H	L	A	.	.	.	.	K	R	V	D	F	I	S	V	G	T	N	D	L	T	Q	Y	I	L	A	V	D	R	N	N	T	R	V	A	N
Query Conservation																																																	.	.	.	.
Alig confidence																			.	.	.	.																											.	.	.	.
Template Conservation																			.	.	.	.
Template Sequence		L	E	A	R	L	W	N	D	V	F	V	F	A	Q	K	Y	I	.	.	.	.	G	I	P	N	G	T	I	K	A	T	V	L	L	E	T	I	H	A	S	F	E	M	D	E	I	L	Y	E	L	K	D	H	S	A	G	L	N	C	G	R	W	D	Y	I	F	S	F	L	K	A	F	R	N	H	N	E	F	L	L
Template Known Secondary structure																			.	.	.	.	T			T	T										S					T	S								T	G	G	G								S											T	T	T		T	T
Template Predicted Secondary structure																			.	.	.	.
Template SS confidence
		217	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.					.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.
		639	640	.	.					.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.	.
Predicted Secondary structure						.	.	.	.
Query SS confidence						.	.	.	.
Query Sequence		I	Y	D	S	.	.	.	.	L	H	P	A	M	L	R	A	L	A	M	I	A	R	E	A	E	I	H	G	I
Query Conservation						.	.	.	.
Alig confidence						.	.	.	.
Template Conservation
Template Sequence		P	D	R	A	Q	V	T	M	T	A	P	F	M	R	A	Y	S	L	K	V	I	Q	T	C	H	R	R	N	A
Template Known Secondary structure				G	G	G			T	T	S																	T	T
Template Predicted Secondary structure
Template SS confidence
		293	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions