Return to main results Retrieve Phyre Job Id

Job DescriptionP37177
Confidence80.36%DateThu Jan 5 11:54:54 GMT 2012
Rank121Aligned Residues90
% Identity24%Templatec3cprB_
PDB info PDB header:lyaseChain: B: PDB Molecule:dihydrodipicolinate synthetase; PDBTitle: the crystal structure of corynebacterium glutamicum2 dihydrodipicolinate synthase to 2.2 a resolution
Resolution2.20 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   382.......390.........400.........410.........420.........430.........440.... .....450.....
Predicted Secondary structure 






















......


Query SS confidence 






























































. . . . . .










Query Sequence  RTLIVDGYRGELLVDPEPVLLQEYQRLISEEIELSRLAEDDVNLPAQLKSGERIKVMLNAGLS. . . . . . PEHEEKLGSRI
Query Conservation    




  
 
   
                               
 

       
    ......         

Alig confidence 
































...................










......










Template Conservation   

 
 




   

  

  
          ...................   

 

   
    
  
  
   

Template Sequence  DSLVLAGTTGESPTTTAAEKLELLKAVREEVGD. . . . . . . . . . . . . . . . . . . RAKLIAGVGTNNTRTSVELAEAAASAGA
Template Known Secondary structure 
SSTTTTTTTS
TT...................TS


SSTT
Template Predicted Secondary structure 










...................









Template SS confidence 















































































   52.......60.........70.........80.... .....90.........100.........110..
 
   456...460.........470.........480.........490.......
Predicted Secondary structure 












Query SS confidence 









































Query Sequence  DGIGLYRTEIPFMLQSGFPSEEEQVAQYQGMLQMFNDKPVTL
Query Conservation   



 


         
 
  
   
           
 
Alig confidence 


......

























.





Template Conservation 
 
...... 
 

     
   
      

 
 .  

 
Template Sequence  DGL. . . . . . LVVTPYYSKPSQEGLLAHFGAIAAAT. EVPICL
Template Known Secondary structure  S......


SS



.
S
Template Predicted Secondary structure 
......









.


Template SS confidence 









































   113.. ....120.........130.........140. ......
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions