Job Description P37177 Confidence 51.80% Date Thu Jan 5 11:54:54 GMT 2012 Rank 161 Aligned Residues 134 % Identity 10% Template c3bjnA_ PDB info PDB header:transcription regulator Chain: A: PDB Molecule:transcriptional regulator, putative; PDBTitle: crystal structure of c-terminal domain of putative transcriptional2 regulator from vibrio cholerae, targeted domain 79-240 Resolution 1.65 Å

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		14	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.					.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.
Predicted Secondary structure																																																							.	.	.	.																						.	.
Query SS confidence																																																							.	.	.	.																						.	.
Query Sequence		S	A	P	R	L	N	E	A	L	N	I	L	V	T	D	I	C	L	A	M	D	T	E	V	C	S	V	Y	L	A	D	H	D	R	R	C	Y	Y	L	M	A	T	R	G	L	K	K	P	R	G	R	T	V	.	.	.	.	T	L	A	F	D	E	G	I	V	G	L	V	G	R	L	A	E	P	I	N	L	.	.
Query Conservation																																																							.	.	.	.																						.	.
Alig confidence																									.	.	.																												.	.	.	.																						.	.
Template Conservation																									.	.	.
Template Sequence		T	S	Q	H	N	L	D	A	V	E	A	V	L	S	R	L	Q	K	Q	T	G	E	X	.	.	.	A	A	Y	X	V	P	V	G	Y	R	A	L	C	V	S	Q	R	E	S	X	Q	A	L	R	C	S	F	V	Q	G	Q	S	Q	P	L	L	R	G	A	S	S	K	V	X	L	A	Y	X	P	A	A	R	C	E
Template Known Secondary structure		T	T	S	T	T																S	S		.	.	.								T	T											S	S					S			T	T					T	T	S											S
Template Predicted Secondary structure																									.	.	.
Template SS confidence
		82	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.				.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.
									88	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.											.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150
Predicted Secondary structure		.	.	.	.	.	.	.																					.	.	.	.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.																					.	.	.	.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	A	D	A	Q	K	H	P	S	F	K	Y	I	P	S	V	K	E	E	R	F	.	.	.	.	.	.	.	.	.	.	R	A	F	L	G	V	P	I	I	Q	R	R	Q	L	L	G	V	L	V	V	Q	Q	R	E	L	R	Q	Y	D	E	S	E	E	S	F	L	V	T	L	A	T	Q	M
Query Conservation		.	.	.	.	.	.	.																					.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.																					.	.	.	.	.	.	.	.	.	.																											.
Template Conservation																																																																	.
Template Sequence		K	I	L	R	Y	F	G	E	D	P	T	L	D	K	W	Q	S	E	F	E	K	I	R	R	H	G	Y	A	V	S	T	S	E	I	D	P	G	V	S	G	I	S	A	P	V	X	K	G	S	K	L	I	G	A	I	S	V	X	A	P	A	H	R	.	V	E	S	N	K	Q	R	I	I	L	H	V	L	Q	A	A
Template Known Secondary structure							T	T			T	T	S														T	S					S	S	S	S	T	T											T	T															.
Template Predicted Secondary structure																																																																	.
Template SS confidence
		159	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.		.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.
		151
Predicted Secondary structure
Query SS confidence
Query Sequence		A
Query Conservation
Alig confidence
Template Conservation
Template Sequence		R
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		238

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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