Job Description P37177 Confidence 77.56% Date Thu Jan 5 11:54:54 GMT 2012 Rank 129 Aligned Residues 97 % Identity 19% Template c2zrvC_ PDB info PDB header:isomerase Chain: C: PDB Molecule:isopentenyl-diphosphate delta-isomerase; PDBTitle: crystal structure of sulfolobus shibatae isopentenyl2 diphosphate isomerase in complex with reduced fmn. Resolution 2.30 Å

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		319	320	.	.	.	.	.			.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.																		.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.
Predicted Secondary structure									.	.																																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence									.	.																																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		W	P	E	R	F	I	L	.	.	V	A	D	E	L	S	A	T	T	L	A	E	L	P	Q	D	R	L	V	G	V	V	V	R	D	G	A	A	N	S	H	A	A	I	M	V	R	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	A	L	G	I	P	T	V	M	G	A	D	I	Q	P	S	V	L
Query Conservation									.	.																																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence									.	.																																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		L	S	V	P	I	I	V	K	E	S	G	N	G	I	S	M	E	T	A	K	L	L	Y	S	Y	G	I	K	N	F	D	T	S	G	Q	G	G	T	N	W	I	A	I	E	M	I	R	D	I	R	R	G	N	W	K	A	E	S	A	K	N	F	L	D	W	G	V	P	T	A	A	S	I	M	E	V	R	Y	S	V
Template Known Secondary structure			S	S							S	S	S													T	T									B	T	S	B													T	T		T								T	T	T		S		B												S
Template Predicted Secondary structure
Template SS confidence
		186	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.
		380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		H	R	R	T	L	I	V	D	G	Y	R	G	E	L	L	V	D	P	E	P	V	L	L	Q	E	Y	Q	R	L	I	S	E	E	I	E	L	S	R	L	A	E	D	D	V	N	L	P	A	Q	L	K	S	G	E	R	I	K	V	M	L	N	A	G	L	S	P	E	H	E	E	K	L	G	S	R	I	D	G	I	G
Query Conservation
Alig confidence												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		P	D	S	F	L	V	G	S	G	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	I	R	S	G	L	D	A	A	K	A	I	A	L	G	A	D	I	A	G
Template Known Secondary structure		T	T							S	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.			S											T		S
Template Predicted Secondary structure												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		266	.	.	.	270	.	.	.	.	.																																																				.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.
		460	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	Y	R	T	E	I	P	F
Query Conservation
Alig confidence						.
Template Conservation						.
Template Sequence		M	A	L	P	.	V	L	K
Template Known Secondary structure						.
Template Predicted Secondary structure						.
Template SS confidence
		295	.	.	.		.	300	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions