Job Description P37177 Confidence 99.77% Date Thu Jan 5 11:54:54 GMT 2012 Rank 35 Aligned Residues 136 % Identity 13% Template c2vjwA_ PDB info PDB header:hydrolase Chain: A: PDB Molecule:gaf family protein; PDBTitle: crystal structure of the second gaf domain of devs from2 mycobacterium smegmatis Resolution 2.0 Å

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		17	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	L	N	E	A	L	N	I	L	V	T	D	I	C	L	A	M	D	T	E	V	C	S	V	Y	L	A	D	H	D	R	R	C	Y	Y	L	M	A	T	R	G	L	K	K	P	R	G	R	T	V	T	L	A	F	D	E	G	I	V	G	L	V	G	R	L	A	E	P	I	N	L	A	D	A	Q	K	H	P	S	F
Query Conservation
Alig confidence
Template Conservation
Template Sequence		D	P	A	T	V	F	R	L	V	A	A	E	A	L	T	L	T	G	A	D	G	T	L	V	A	V	P	A	D	A	A	E	E	L	V	I	V	E	V	A	G	A	V	P	A	E	V	E	A	S	A	I	P	V	Q	D	N	A	I	G	Q	A	F	R	D	R	A	P	R	R	L	D	V	L	D	G	P	G	L	G
Template Known Secondary structure			T																		S												S										T	S		G	G	G	T	T					S	S	S	S															S				T	T	S
Template Predicted Secondary structure
Template SS confidence
		232	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.
		97	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.		.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.
Predicted Secondary structure																																		.
Query SS confidence																																		.
Query Sequence		K	Y	I	P	S	V	K	E	E	R	F	R	A	F	L	G	V	P	I	I	Q	R	R	Q	L	L	G	V	L	V	V	Q	.	Q	R	E	L	R	Q	Y	D	E	S	E	E	S	F	L	V	T	L	A	T	Q	M	A	A	I	L	S	Q	S	Q	L	T	A	L	F
Query Conservation																																		.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.																						.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	G	P	A	L	V	L	P	L	R	A	T	D	T	V	A	G	V	L	V	A	V	Q	G	S	G	A	R	P	F	T	A	E	Q	L	E	X	X	T	G	F	A	D	Q	A	A	V	A	W	Q	L	A	S	S	Q	R	R	X
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.											T	T												T	T																																T
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
													316	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions