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Job DescriptionP37177
Confidence83.02%DateThu Jan 5 11:54:54 GMT 2012
Rank113Aligned Residues90
% Identity20%Templatec2v9dB_
PDB info PDB header:lyaseChain: B: PDB Molecule:yage; PDBTitle: crystal structure of yage, a prophage protein belonging to2 the dihydrodipicolinic acid synthase family from e. coli3 k12
Resolution2.15 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   382.......390.........400.........410.........420.........430.........440.... .....450.....
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Query Sequence  RTLIVDGYRGELLVDPEPVLLQEYQRLISEEIELSRLAEDDVNLPAQLKSGERIKVMLNAGLS. . . . . . PEHEEKLGSRI
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Template Sequence  DGLFFLGSGGEFSQLGAEERKAIARFAIDHVDR. . . . . . . . . . . . . . . . . . . RVPVLIGTGGTNARETIELSQHAQQAGA
Template Known Secondary structure  S
SSTTTTGGGS
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   4950.........60.........70.........80. ........90.........100.........
 
   456...460.........470.........480.........490.......
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Query Sequence  DGIGLYRTEIPFMLQSGFPSEEEQVAQYQGMLQMFNDKPVTL
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Template Sequence  DGIVVI. . . . . . NPYYWKVSEANLIRYFEQVADSV. TLPVXL
Template Known Secondary structure  S......

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   110..... ....120.........130........ .140....
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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