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Job Description | P37177 | Confidence | 83.02% | Date | Thu Jan 5 11:54:54 GMT 2012 |
Rank | 113 | Aligned Residues | 90 |
% Identity | 20% | Template | c2v9dB_ |
PDB info |
PDB header:lyase | Chain: B: PDB Molecule:yage; |
PDBTitle: crystal structure of yage, a prophage protein belonging to2 the dihydrodipicolinic acid synthase family from e. coli3 k12
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Resolution | 2.15 Å |
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382 | . | . | . | . | . | . | . | 390 | . | . | . | . | . | . | . | . | . | 400 | . | . | . | . | . | . | . | . | . | 410 | . | . | . | . | . | . | . | . | . | 420 | . | . | . | . | . | . | . | . | . | 430 | . | . | . | . | . | . | . | . | . | 440 | . | . | . | . | |
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Predicted Secondary structure |   |
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Query SS confidence |   |
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Query Sequence |   |
R | T | L | I | V | D | G | Y | R | G | E | L | L | V | D | P | E | P | V | L | L | Q | E | Y | Q | R | L | I | S | E | E | I | E | L | S | R | L | A | E | D | D | V | N | L | P | A | Q | L | K | S | G | E | R | I | K | V | M | L | N | A | G | L | S | . |
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P | E | H | E | E | K | L | G | S | R | I |
Query Conservation |   |
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Alig confidence |   |
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Template Conservation |   |
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Template Sequence |   |
D | G | L | F | F | L | G | S | G | G | E | F | S | Q | L | G | A | E | E | R | K | A | I | A | R | F | A | I | D | H | V | D | R | . |
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R | V | P | V | L | I | G | T | G | G | T | N | A | R | E | T | I | E | L | S | Q | H | A | Q | Q | A | G | A |
Template Known Secondary structure |   |
S |
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Template Predicted Secondary structure |   |
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Template SS confidence |   |
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49 | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | |
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. | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . |
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456 | . | . | . | 460 | . | . | . | . | . | . | . | . | . | 470 | . | . | . | . | . | . | . | . | . | 480 | . | . | . | . | . | . | . | . | . | 490 | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
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Query SS confidence |   |
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Query Sequence |   |
D | G | I | G | L | Y | R | T | E | I | P | F | M | L | Q | S | G | F | P | S | E | E | E | Q | V | A | Q | Y | Q | G | M | L | Q | M | F | N | D | K | P | V | T | L |
Query Conservation |   |
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Alig confidence |   |
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Template Conservation |   |
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Template Sequence |   |
D | G | I | V | V | I | . |
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N | P | Y | Y | W | K | V | S | E | A | N | L | I | R | Y | F | E | Q | V | A | D | S | V | . |
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Template Known Secondary structure |   |
S |  |  |  |  |  | . | . | . | . | . | . |
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Template Predicted Secondary structure |   |
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Template SS confidence |   |
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110 | . | . | . | . | . | |
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. | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | |
. | 140 | . | . | . | . |
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No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
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