Job Description P37177 Confidence 57.94% Date Thu Jan 5 11:54:54 GMT 2012 Rank 156 Aligned Residues 149 % Identity 14% Template c2o0yB_ PDB info PDB header:transcription Chain: B: PDB Molecule:transcriptional regulator; PDBTitle: crystal structure of putative transcriptional regulator rha1_ro069532 (iclr-family) from rhodococcus sp. Resolution 2.00 Å

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		4	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.					.	.	.	70	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																																	.	.	.	.
Query SS confidence																																																																	.	.	.	.
Query Sequence		R	L	R	E	I	V	E	K	V	A	S	A	P	R	L	N	E	A	L	N	I	L	V	T	D	I	C	L	A	M	D	T	E	V	C	S	V	Y	L	A	D	H	D	R	R	C	Y	Y	L	M	A	T	R	G	L	K	K	P	R	G	R	T	V	.	.	.	.	T	L	A	F	D	E	G	I	V	G	L	V	G
Query Conservation																																																																	.	.	.	.
Alig confidence																																			.	.	.																												.	.	.	.
Template Conservation																																			.	.	.
Template Sequence		E	X	L	R	W	V	R	L	A	G	R	T	W	A	P	P	E	E	V	V	D	I	X	R	Q	L	S	A	D	T	G	E	T	.	.	.	V	N	L	Y	I	R	Q	G	L	S	R	V	V	V	A	Q	C	E	S	T	A	T	V	R	S	V	I	P	L	G	V	P	Y	P	L	W	A	G	A	A	G	K	I	L
Template Known Secondary structure		G	G	G	G	G																										S	S		.	.	.								T	T											S		S	S						T	T					S	S	S	S
Template Predicted Secondary structure																																			.	.	.
Template SS confidence
		81	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.				.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.
		80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.										100	.	.	.	.	.	.	.	.											.	110	.	.	.	.	.	.		.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																						.	.	.	.	.	.	.	.	.										.	.	.	.	.	.	.	.	.	.									.
Query SS confidence																						.	.	.	.	.	.	.	.	.										.	.	.	.	.	.	.	.	.	.									.
Query Sequence		R	L	A	E	P	I	N	L	A	D	A	Q	K	H	P	S	F	K	Y	I	.	.	.	.	.	.	.	.	.	P	S	V	K	E	E	R	F	R	.	.	.	.	.	.	.	.	.	.	A	F	L	G	V	P	I	I	.	Q	R	R	Q	L	L	G	V	L	V	V	Q	Q	R	E	L	R	Q	Y	D	E	S	E
Query Conservation																						.	.	.	.	.	.	.	.	.										.	.	.	.	.	.	.	.	.	.									.
Alig confidence																						.	.	.	.	.	.	.	.	.										.	.	.	.	.	.	.	.	.	.									.																		.
Template Conservation																																																																												.
Template Sequence		L	L	A	A	P	E	L	I	D	D	V	A	A	D	S	P	H	G	P	E	F	A	D	Q	L	R	E	K	V	E	D	G	R	E	R	G	Y	Q	L	V	H	G	E	R	E	L	G	S	S	G	L	S	F	P	L	V	D	S	H	G	T	V	V	A	A	L	T	L	G	G	P	T	G	R	.	F	T	E	D	R
Template Known Secondary structure		G	G	G		G	G	G								S	S	S		T	T																S	S					S	S	S	S	T	T											T	T													G	G	G	.	S		T	T	T
Template Predicted Secondary structure																																																																												.
Template SS confidence
		158	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.		.	.	.	.	.
		140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	S	F	L	V	T	L	A	T	Q	M	A	A	I	L	S	Q
Query Conservation
Alig confidence
Template Conservation
Template Sequence		T	P	H	Y	I	E	C	T	R	A	A	A	E	E	I	S	A
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		237	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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