Job Description P37177 Confidence 27.23% Date Thu Jan 5 11:54:54 GMT 2012 Rank 219 Aligned Residues 149 % Identity 11% Template c2fptA_ PDB info PDB header:oxidoreductase Chain: A: PDB Molecule:dihydroorotate dehydrogenase, mitochondrial; PDBTitle: dual binding mode of a novel series of dhodh inhibitors Resolution 2.40 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		566	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.					.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.		.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630	.	.	.	.	.	.	.	.	.	640
Predicted Secondary structure																																.	.	.	.																	.
Query SS confidence																																.	.	.	.																	.
Query Sequence		D	E	A	R	R	L	I	E	R	A	G	R	E	V	E	E	M	I	G	Y	E	I	P	K	P	R	I	G	I	M	.	.	.	.	L	E	V	P	S	M	V	F	M	L	P	H	L	A	K	R	.	V	D	F	I	S	V	G	T	N	D	L	T	Q	Y	I	L	A	V	D	R	N	N	T	R	V	A	N	I	Y
Query Conservation																																.	.	.	.																	.
Alig confidence																		.	.													.	.	.	.																	.					.
Template Conservation																		.	.																																						.
Template Sequence		A	E	L	R	R	L	L	T	K	V	L	Q	E	R	D	G	.	.	L	R	R	V	H	R	P	A	V	L	V	K	I	A	P	D	L	T	S	Q	D	K	E	D	I	A	S	V	V	K	E	L	G	I	D	G	L	.	I	V	T	N	T	T	V	S	R	P	A	G	L	Q	G	A	L	R	S	E	T	G	G	L
Template Known Secondary structure																	T	.	.	S		G	G	G										S																		T					.						B	S				T	T				T	T	T	T	S	S	S
Template Predicted Secondary structure																		.	.																																						.
Template SS confidence
		228	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.			.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280		.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.
				641	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.	.	.	.	.	.	.	.	670	.	.	.	.	.	.	.	.	.	680	.	.	.	.	.	.	.	.	.	690	.	.	.	.	.	.	.	.	.	700	.	.	.	.	.	.	.	.	.	710	.	.	.	.	.	.	.	.
Predicted Secondary structure		.	.
Query SS confidence		.	.
Query Sequence		.	.	D	S	L	H	P	A	M	L	R	A	L	A	M	I	A	R	E	A	E	I	H	G	I	D	L	R	L	C	G	E	M	A	G	D	P	M	C	V	A	I	L	I	G	L	G	Y	R	H	L	S	M	N	G	R	S	V	A	R	A	K	Y	L	L	R	R	I	D	Y	A	E	A	E	N	L	A	Q	R	S
Query Conservation		.	.
Alig confidence		.	.																					.												.																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																								.												.																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		S	G	K	P	L	R	D	L	S	T	Q	T	I	R	E	M	Y	A	L	T	Q	G	.	R	V	P	I	I	G	V	G	G	V	S	.	S	G	Q	D	A	L	E	K	I	R	A	G	A	S	L	V	Q	L	Y	T	A	L	T	F	W	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure																					T	T	T	.		S						S	S			.	S											T		S					S							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																								.												.																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		305	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.		.	.	.	330	.	.	.	.	.	.	.		.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.
		719	720	.	.	.	.	.	.	.	.	.	730	.	.	.	.	.	.	.	.	.	740
Predicted Secondary structure
Query SS confidence
Query Sequence		L	E	A	Q	L	A	T	E	V	R	H	Q	V	A	A	F	M	E	R	R	G	M
Query Conservation
Alig confidence		.
Template Conservation		.
Template Sequence		.	G	P	P	V	V	G	K	V	K	R	E	L	E	A	L	L	K	E	Q	G	F
Template Known Secondary structure		.		T																	T	T
Template Predicted Secondary structure		.
Template SS confidence
			363	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions