 |
Job Description | P37177 | Confidence | 98.92% | Date | Thu Jan 5 11:54:54 GMT 2012 |
Rank | 71 | Aligned Residues | 74 |
% Identity | 24% | Template | c2e28A_ |
PDB info |
PDB header:transferase | Chain: A: PDB Molecule:pyruvate kinase; |
PDBTitle: crystal structure analysis of pyruvate kinase from bacillus2 stearothermophilus
|
Resolution | 2.40 Å |
|
 |
  |   |
319 | 320 | . | . | . | . | . | . | . | . | . | 330 | . | . | . | . | . | . | . | . | . | 340 | . | . | . | . | . | . | . | . | . | 350 | . | . | . | . | . | . | . | . | . | 360 | . | . | . | . | . | . | . | . | . | 370 | . | . | |
. | . | . | . | . | . | . | 380 | . | . | . | . | . | . | . | . | . | 390 | . | . | . | . |
Predicted Secondary structure |   |
|
|
|
|
|  |  |  |  |
|
|
|
|  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |
|
| . |
|
|  |  |  |  |
|
|
|
|  |  |  |  |  |
|
|
|
|  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
W | P | E | R | F | I | L | V | A | D | E | L | S | A | T | T | L | A | E | L | P | Q | D | R | L | V | G | V | V | V | R | D | G | A | A | N | S | H | A | A | I | M | V | R | A | L | G | I | P | T | V | M | G | A | . |
D | I | Q | P | S | V | L | H | R | R | T | L | I | V | D | G | Y | R | G | E | L | L |
Query Conservation |   |
  |   |   |   |   |
|
|
|
|   |   |
|   |
|
|   |   |   |   |
|   |   |   |   |
|   |
|
|
|
|   |   |
|
|   |
|
|
|   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|   | . |   |   |   |   |   |   |   |   |
|   |   |
|
|
|
|
|   |   |
|   |
|   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |   |
|   |
|   |
|   |   |   |   |   |   |   |   |   |   |   |   | . | . |   |   |   |   |   |
|
|   |   |   |   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |
|
|   |
|   |   |   |
|   |
|   |
Template Sequence |   |
M | V | D | G | G | I | L | V | T | V | S | T | D | A | D | M | M | P | A | I | . |
. |
E | K | A | A | A | I | I | T | E | E | G | G | L | T | S | H | A | A | V | V | G | L | S | L | G | I | P | V | I | V | G | V | E | N | A | T | T | L | F | K | D | G | Q | E | I | T | V | D | G | G | F | G | A | V | Y |
Template Known Secondary structure |   |
|
| T | T |
|  |  |  |  | S |
|
|
| G | G | G |  |  |  |  | . | . | T | T |
| S |  |  |  |  | S | S |
|
| T | T | S |  |  |  |  |  |  |  |  |  | T |
|
|  |  |  |
|
| T | T |  |  |  |  | S |
| T | T |
| B |  |  |  |  | T | T | T | T |  |  |  |
Template Predicted Secondary structure |   |
|
|
|
|
|  |  |  |  |
|
|
|
|  |  |  |  |  |  |  | . | . |  |  |
|
|  |  |  |  |  |
|
|
|
|
|
|
|  |  |  |  |  |  |  |
|
|
|  |  |  |  |
|
|
|
|  |  |  |  |  |  |
|
|
|  |  |  |  |  |
|
|
|
|  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
506 | . | . | . | 510 | . | . | . | . | . | . | . | . | . | 520 | . | . | . | . | . | |
|
. | . | . | . | 530 | . | . | . | . | . | . | . | . | . | 540 | . | . | . | . | . | . | . | . | . | 550 | . | . | . | . | . | . | . | . | . | 560 | . | . | . | . | . | . | . | . | . | 570 | . | . | . | . | . | . | . | . | . | 580 |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|