Job Description P37177 Confidence 96.81% Date Thu Jan 5 11:54:54 GMT 2012 Rank 92 Aligned Residues 152 % Identity 7% Template c2avxA_ PDB info PDB header:transcription Chain: A: PDB Molecule:regulatory protein sdia; PDBTitle: solution structure of e coli sdia1-171 Resolution UNK

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		6	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.		.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.				.	.	.	70	.	.	.	.	.	.	.	.	.	80	.
Predicted Secondary structure																																							.																									.	.	.
Query SS confidence																																							.																									.	.	.
Query Sequence		R	E	I	V	E	K	V	A	S	A	P	R	L	N	E	A	L	N	I	L	V	T	D	I	C	L	A	M	D	T	E	V	C	S	V	Y	L	.	A	D	H	D	R	R	C	Y	Y	L	M	A	T	R	G	L	K	K	P	R	G	R	T	V	.	.	.	T	L	A	F	D	E	G	I	V	G	L	V	G	R	L
Query Conservation																																							.																									.	.	.
Alig confidence																											.												.																									.	.	.
Template Conservation																											.
Template Sequence		R	T	M	L	L	R	F	Q	R	M	E	T	A	E	E	V	Y	H	E	I	E	L	Q	A	Q	.	Q	L	E	Y	D	Y	Y	S	L	C	V	R	H	P	V	P	F	T	R	P	K	V	A	F	Y	T	N	Y	P	E	A	W	V	S	Y	Y	Q	A	K	N	F	L	A	I	D	P	V	L	N	P	E	N	F	S
Template Known Secondary structure											T		S														.	T	T	T		S											T	T	S																					T	T	G	G	G	T		G	G	G		T	T	T		T
Template Predicted Secondary structure																											.
Template SS confidence
		11	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.		.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.
		82	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.				.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																									.	.	.
Query SS confidence																																																									.	.	.
Query Sequence		A	E	P	I	N	L	A	D	A	Q	K	H	P	S	F	K	Y	I	P	S	V	K	E	E	R	F	R	A	F	L	G	V	P	I	I	Q	R	R	Q	L	L	G	V	L	V	V	Q	Q	R	E	L	R	Q	Y	D	.	.	.	E	S	E	E	S	F	L	V	T	L	A	T	Q	M	A	A	I	L	S	Q	S	Q
Query Conservation																																																									.	.	.
Alig confidence																																																									.	.	.
Template Conservation
Template Sequence		Q	G	H	L	M	W	N	D	D	L	F	S	E	A	Q	P	L	W	E	A	A	R	A	H	G	L	R	R	G	V	T	Q	Y	L	M	L	P	E	R	A	L	G	F	L	S	F	S	R	C	S	A	R	E	I	P	I	L	S	D	E	L	Q	L	K	M	Q	L	L	V	R	E	S	L	M	A	L	M	R	L	N
Template Known Secondary structure		T	S						T	T	T	T	S	S												T												T	T											S						S	S
Template Predicted Secondary structure
Template SS confidence
		90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions