Job Description P37177 Confidence 100.00% Date Thu Jan 5 11:54:54 GMT 2012 Rank 6 Aligned Residues 371 % Identity 26% Template c1vbhA_ PDB info PDB header:transferase Chain: A: PDB Molecule:pyruvate,orthophosphate dikinase; PDBTitle: pyruvate phosphate dikinase with bound mg-pep from maize Resolution 2.30 Å

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		318	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.														.	.	.	380	.	.	.	.
Predicted Secondary structure																																																													.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																													.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		A	W	P	E	R	F	I	L	V	A	D	E	L	S	A	T	T	L	A	E	L	P	Q	D	R	L	V	G	V	V	V	R	D	G	A	A	N	S	H	A	A	I	M	V	R	A	L	G	I	P	T	V	M	G	A	D	I	Q	P	.	.	.	.	.	.	.	.	.	.	.	.	.	S	V	L	H	R	R	T	L
Query Conservation																																																													.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																							.	.										.	.	.																									.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																							.	.										.	.	.
Template Sequence		S	Q	G	K	A	A	I	L	V	R	A	E	T	S	P	E	D	V	G	G	M	.	.	H	A	A	V	G	I	L	T	E	.	.	.	M	T	S	H	A	A	V	V	A	R	G	W	G	K	C	C	V	S	G	C	S	G	I	R	V	N	D	A	E	K	L	V	T	I	G	G	H	V	L	R	E	G	E	W	L
Template Known Secondary structure			T	T								S	S			T	T	T					.	.			S	S						.	.	.			S										T									S					T	T	T	T					T	T					T	T
Template Predicted Secondary structure																							.	.										.	.	.
Template SS confidence
		422	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.			.	.	.	.	.	.	.	450	.				.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.
		385	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	V	D	G	Y	R	G	E	L	L	V	D	P	E	P	V	L	L	Q	E	Y	Q	R	L	I	S	E	E	I	E	L	S	R	L	A	E	D	D	V	N	L	P	A	Q	L	K	S	G	E	R	I	K	V	M	L	N	A	G	L	S	P	E	H	E	E	K	L	G	S	R	I	D	G	I	G	L	Y	R	T	E
Query Conservation
Alig confidence																																	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		S	L	N	G	S	T	G	E	V	I	L	G	K	Q	P	L	S	P	P	A	L	S	G	D	L	G	T	F	M	A	W	.	.	.	.	.	.	.	.	.	.	.	.	.	V	D	D	V	R	K	L	K	V	L	A	N	A	D	T	P	D	D	A	L	T	A	R	N	N	G	A	Q	G	I	G	L	C	R	T	E
Template Known Secondary structure					T	T	T					B	S				B						S										.	.	.	.	.	.	.	.	.	.	.	.	.							S								S										T	T			S						G	G
Template Predicted Secondary structure																																	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530														.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.
		465	.	.	.	.	470	.	.	.	.	.																						.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.
Predicted Secondary structure													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																							.	.	.	.	.	.	.	.	.	.
Query SS confidence													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																							.	.	.	.	.	.	.	.	.	.
Query Sequence		I	P	F	M	L	Q	S	G	F	P	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	E	E	E	Q	V	A	Q	Y	Q	G	M	L	Q	M	F	N	D	K	P	V	T	L	R	T	L	D	V	G	A	D	K	Q	L	P	Y	M	P	I	.	.	.	.	.	.	.	.	.	.
Query Conservation													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																							.	.	.	.	.	.	.	.	.	.
Alig confidence													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																							.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		H	M	F	F	A	S	D	E	R	I	K	A	V	R	Q	M	I	M	A	P	T	L	E	L	R	Q	Q	A	L	D	R	L	L	P	Y	Q	R	S	D	F	E	G	I	F	R	A	M	D	G	L	P	V	T	I	R	L	L	D	P	P	L	H	E	F	L	P	E	G	N	I	E	D	I	V	S	E	L	C	A	E
Template Known Secondary structure		G	G	T	T	T															S	S																										T	T	T	S									S		G	G	G	G	S			S
Template Predicted Secondary structure
Template SS confidence
		567	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.
																	514	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.							.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																			.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																			.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S	E	E	N	P	C	L	G	W	R	G	I	R	I	T	L	D	Q	P	E	I	F	L	I	Q	V	R	A	M	L	R	A	N	A	.	.	.	.	.	.	A	T	G	N	L	N	I	L	L	P	M	V	T	S	L	D	E	V	D	E	A	R	R	L	I
Query Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																			.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																			.	.	.	.	.	.
Template Conservation
Template Sequence		T	G	A	N	Q	E	D	A	L	A	R	I	E	K	L	S	E	V	N	P	M	L	G	F	R	G	C	R	L	G	I	S	Y	P	E	L	T	E	M	Q	A	R	A	I	F	E	A	A	I	A	M	T	N	Q	G	V	Q	V	F	P	E	I	M	V	P	L	V	G	T	P	Q	E	L	G	H	Q	V	T	L	I
Template Known Secondary structure																			S		G	G	G	S	S		T																											T	T	T											S			S
Template Predicted Secondary structure
Template SS confidence
		647	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.	.	.	.	.	.	.	.	670	.	.	.	.	.	.	.	.	.	680	.	.	.	.	.	.	.	.	.	690	.	.	.	.	.	.	.	.	.	700	.	.	.	.	.	.	.	.	.	710	.	.	.	.	.	.	.	.	.	720	.	.	.	.	.	.
		573	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630	.	.	.	.	.							.	.	.	.	640	.	.	.	.	.
Predicted Secondary structure																																																																	.	.	.	.	.	.											.
Query SS confidence																																																																	.	.	.	.	.	.											.
Query Sequence		E	R	A	G	R	E	V	E	E	M	I	G	Y	E	I	P	K	P	R	I	G	I	M	L	E	V	P	S	M	V	F	M	L	P	H	L	A	K	R	V	D	F	I	S	V	G	T	N	D	L	T	Q	Y	I	L	A	V	D	R	N	N	T	R	.	.	.	.	.	.	V	A	N	I	Y	D	S	L	H	P	.
Query Conservation																																																																	.	.	.	.	.	.											.
Alig confidence									.																																																								.	.	.	.	.	.											.
Template Conservation									.
Template Sequence		R	Q	V	A	E	K	V	.	F	A	N	V	G	K	T	I	G	Y	K	V	G	T	M	I	E	I	P	R	A	A	L	V	A	D	E	I	A	E	Q	A	E	F	F	S	F	G	T	N	D	L	T	Q	M	T	F	G	Y	S	R	D	D	V	G	K	F	I	P	V	Y	L	A	Q	G	I	L	Q	H	D	P	F
Template Known Secondary structure									.				T	T													S						T					T	T	T		S															T							T	T	T							T	T	S		S	S		T	T
Template Predicted Secondary structure									.
Template SS confidence
		727	.	.	730	.	.	.		.	.	.	.	.	.	740	.	.	.	.	.	.	.	.	.	750	.	.	.	.	.	.	.	.	.	760	.	.	.	.	.	.	.	.	.	770	.	.	.	.	.	.	.	.	.	780	.	.	.	.	.	.	.	.	.	790	.	.	.	.	.	.	.	.	.	800	.	.	.	.	.
								646	.	.	.	650	.	.	.	.	.	.	.	.	.	660	.			.	.	.	.	.	.	.	.	670	.	.	.	.	.	.	.	.	.	680	.	.	.	.	.	.	.	.	.	690	.	.	.	.	.	.	.	.	.	700	.	.	.	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.																	.	.
Query SS confidence		.	.	.	.	.	.																	.	.
Query Sequence		.	.	.	.	.	.	A	M	L	R	A	L	A	M	I	A	R	E	A	E	I	H	.	.	G	I	D	L	R	L	C	G	E	M	A	G	D	P	M	C	V	A	I	L	I	G	L	G	Y	R	H	L	S	M	N	G	R	S	V	A	R	A	K	Y	L	L	R	R	I	D
Query Conservation		.	.	.	.	.	.																	.	.
Alig confidence		.	.	.	.	.	.																	.	.
Template Conservation
Template Sequence		E	V	L	D	Q	R	G	V	G	E	L	V	K	F	A	T	E	R	G	R	K	A	R	P	N	L	K	V	G	I	C	G	E	H	G	G	E	P	S	S	V	A	F	F	A	K	A	G	L	D	Y	V	S	C	S	P	F	R	V	P	I	A	R	L	A	A	A	Q	V	L
Template Known Secondary structure		T	S			T	T	T																S	T	T							S	G	G	G	G												T		S						G	G	G											T	T
Template Predicted Secondary structure
Template SS confidence
		806	.	.	.	810	.	.	.	.	.	.	.	.	.	820	.	.	.	.	.	.	.	.	.	830	.	.	.	.	.	.	.	.	.	840	.	.	.	.	.	.	.	.	.	850	.	.	.	.	.	.	.	.	.	860	.	.	.	.	.	.	.	.	.	870	.	.	.	.	.