Return to main results Retrieve Phyre Job Id

Job DescriptionP0A9N4
Confidence67.21%DateThu Jan 5 11:10:48 GMT 2012
Rank82Aligned Residues74
% Identity16%Templated1e43a2
SCOP infoTIM beta/alpha-barrel (Trans)glycosidases Amylase, catalytic domain
Resolution1.7

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   171........180.........190.........200.........210......... 220.........230.........240
Predicted Secondary structure 
























..........







Query SS confidence 
















































. . . . . . . . . .




















Query Sequence  VPGWSDDDDSAHRLGEFTRDMGNVEKIELLPYHELGKHKWVAMGEEYKL. . . . . . . . . . DGVKPPKKETMERVKGILEQY
Query Conservation 
         
  
      
     
   
    
             ..........        
            
Alig confidence 





















.

























..........




















Template Conservation      


  

  




  

.
  
 
 

         

     
          


  

  

  

   
  
Template Sequence  TPNDGQHWKRLQNDAEHLSDIG. ITAVWIPPAYKGLSQSDNGYGPYDLYDLGEFQQKGTVRTKYGTKSELQDAIGSLHSR
Template Known Secondary structure 

SSS
T.




SSSTT

SSSTT
SS
S
BTTBSS
SS

T
Template Predicted Secondary structure 








.







































Template SS confidence 















































































   13......20.........30.... .....40.........50.........60.........70.........80.........90.
 
   241....
Predicted Secondary structure 

Query SS confidence 




Query Sequence  GHKVM
Query Conservation 
  

Alig confidence 




Template Conservation 

 

Template Sequence  NVQVY
Template Known Secondary structure  T
Template Predicted Secondary structure 

Template SS confidence 




   92....
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions