 |
Job Description | P0A9N4 | Confidence | 67.21% | Date | Thu Jan 5 11:10:48 GMT 2012 |
Rank | 82 | Aligned Residues | 74 |
% Identity | 16% | Template | d1e43a2 |
SCOP info | TIM beta/alpha-barrel
| (Trans)glycosidases
| Amylase, catalytic domain
|
Resolution | 1.7 |
|
 |
  |   |
171 | . | . | . | . | . | . | . | . | 180 | . | . | . | . | . | . | . | . | . | 190 | . | . | . | . | . | . | . | . | . | 200 | . | . | . | . | . | . | . | . | . | 210 | . | . | . | . | . | . | . | . | . | |
|
|
|
|
|
|
|
|
|
220 | . | . | . | . | . | . | . | . | . | 230 | . | . | . | . | . | . | . | . | . | 240 |
Predicted Secondary structure |   |
 |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |
|
|
|
|
|
|
|
|  |  |  |
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
V | P | G | W | S | D | D | D | D | S | A | H | R | L | G | E | F | T | R | D | M | G | N | V | E | K | I | E | L | L | P | Y | H | E | L | G | K | H | K | W | V | A | M | G | E | E | Y | K | L | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
D | G | V | K | P | P | K | K | E | T | M | E | R | V | K | G | I | L | E | Q | Y |
Query Conservation |   |
|   |   |   |   |   |   |   |   |   |
|   |   |
|   |   |   |   |   |   |
|   |   |   |   |   |
|   |   |   |
|   |   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   | . | . | . | . | . | . | . | . | . | . |   |   |   |   |   |   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |   |   |
|
|
|   |   |
|
|   |   |
|
|
|
|
|   |   |
|
| . |
|   |   |
|   |
|   |
|
|   |   |   |   |   |   |   |   |   |
|
|   |   |   |   |   |
|   |   |   |   |   |   |   |   |   |   |
|
|
|   |   |
|
|   |   |
|
|   |   |
|
|   |   |   |
|   |   |
Template Sequence |   |
T | P | N | D | G | Q | H | W | K | R | L | Q | N | D | A | E | H | L | S | D | I | G | . |
I | T | A | V | W | I | P | P | A | Y | K | G | L | S | Q | S | D | N | G | Y | G | P | Y | D | L | Y | D | L | G | E | F | Q | Q | K | G | T | V | R | T | K | Y | G | T | K | S | E | L | Q | D | A | I | G | S | L | H | S | R |
Template Known Secondary structure |   |
|
| S | S | S |
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | T | . |
|
|  |  |  |  |
|
|
| S |  |  | S | S | T | T |
|
| S | S | S |  |  |  | T | T |
| S | S |
| S |
| B | T | T | B | S | S |
| S | S |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  | T |
Template Predicted Secondary structure |   |
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
| . |
|
|  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
13 | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | |
. | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . |
  |
  |   |
241 | . | . | . | . |
Predicted Secondary structure |   |
|
|  |  |  |
Query SS confidence |   |
|
|
|
|
|
Query Sequence |   |
G | H | K | V | M |
Query Conservation |   |
|   |   |
|
|
Alig confidence |   |
|
|
|
|
|
Template Conservation |   |
|
|   |
|
|
Template Sequence |   |
N | V | Q | V | Y |
Template Known Secondary structure |   |
T |
|  |  |  |
Template Predicted Secondary structure |   |
|
|  |  |  |
Template SS confidence |   |
|
|
|
|
|
  |   |
92 | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|