Job Description P0A9N4 Confidence 99.93% Date Thu Jan 5 11:10:48 GMT 2012 Rank 2 Aligned Residues 218 % Identity 19% Template c3rfaA_ PDB info PDB header:oxidoreductase Chain: A: PDB Molecule:ribosomal rna large subunit methyltransferase n; PDBTitle: x-ray structure of rlmn from escherichia coli in complex with s-2 adenosylmethionine Resolution 2.05 Å

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		10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.		.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.								.	70	.	.	.	.	.	.	.	.		.	80
Predicted Secondary structure																					.																																									.	.	.	.	.	.	.											.
Query SS confidence																					.																																									.	.	.	.	.	.	.											.
Query Sequence		F	E	S	C	G	T	V	D	G	P	G	I	R	F	I	T	F	F	Q	.	G	C	L	M	R	C	L	Y	C	H	N	R	D	T	W	D	T	H	G	G	K	E	V	T	V	E	D	L	M	K	E	V	V	T	Y	R	H	F	M	N	.	.	.	.	.	.	.	A	S	G	G	G	V	T	A	S	G	.	G	E
Query Conservation																					.																																									.	.	.	.	.	.	.											.
Alig confidence																					.											.	.	.																												.	.	.	.	.	.	.											.
Template Conservation																																.	.	.
Template Sequence		V	E	T	V	Y	I	P	E	D	D	R	A	T	L	C	V	S	S	Q	V	G	C	A	L	E	C	K	F	C	S	.	.	.	T	A	Q	Q	G	F	N	R	N	L	R	V	S	E	I	I	G	Q	V	W	R	A	A	K	I	V	G	A	A	K	V	T	G	Q	R	P	I	T	N	V	V	M	M	G	M	G	E
Template Known Secondary structure										S	S													S	S			T	T		G	.	.	.	G	G	T	T																													S	S		S		S						S	S	S
Template Predicted Secondary structure																																.	.	.
Template SS confidence
		104	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.				.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180
		81	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.				.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.									.	.	.
Predicted Secondary structure																				.	.	.																																																	.	.	.	.	.	.	.	.
Query SS confidence																				.	.	.																																																	.	.	.	.	.	.	.	.
Query Sequence		A	I	L	Q	A	E	F	V	R	D	W	F	R	A	C	K	K	E	.	.	.	G	I	H	T	C	L	D	T	N	G	F	V	R	R	Y	D	P	V	I	D	E	L	L	E	V	T	D	L	V	M	L	D	L	K	Q	M	N	D	E	I	H	Q	N	L	V	G	V	S	.	.	.	.	.	.	.	.	N	H	R
Query Conservation																				.	.	.																																																	.	.	.	.	.	.	.	.
Alig confidence																				.	.	.																																																	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		P	L	L	N	L	N	N	V	V	P	A	M	E	I	M	L	D	D	F	G	F	G	L	S	K	R	R	V	T	L	S	T	S	G	V	V	P	A	L	D	K	L	G	D	M	I	D	V	A	L	A	I	S	L	H	A	P	N	D	E	I	R	D	E	I	V	P	I	N	K	K	Y	N	I	E	T	F	L	A	A
Template Known Secondary structure		G	G	G														S	T	T	T	T				G	G	G						S																								S	S								S	G	G	G	G	T	S
Template Predicted Secondary structure
Template SS confidence
		181	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260
		150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	L	E	F	A	K	Y	L	A	N	K	N	V	K	V	W	I	R	Y	V	V	V	P	G	W	S	D	D	D	D	S	A	H	R	L	G	E	F	T	R	D	M	G	N	V	E	K	I	E	L	L	P	Y	H	E	L	G	K	H	K	W	V	A	M	G	E	E	Y	K	L	D	G	V	K	P	P	K	K	E	T
Query Conservation
Alig confidence																																													.	.																.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																													.	.																.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		V	R	R	Y	L	E	K	S	N	A	N	Q	G	R	V	T	I	E	Y	V	M	L	D	H	V	N	D	G	T	E	H	A	H	Q	L	A	E	L	L	K	D	T	P	.	.	C	K	I	N	L	I	P	W	N	P	F	P	G	A	P	.	.	.	.	.	.	.	.	.	.	.	.	Y	G	R	S	S	N	S	R
Template Known Secondary structure										T	T	T	T	T									B	T	T	T	T		S											T	T	T	S		.	.												T	T			.	.	.	.	.	.	.	.	.	.	.	.			B
Template Predicted Secondary structure																																													.	.																.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		261	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.			.	.	.	.	.	.	310	.	.	.	.	.	.	.	.													.	320	.	.	.	.	.	.
		230	.	.	.	.	.	.	.	.	.	240	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		M	E	R	V	K	G	I	L	E	Q	Y	G	H	K	V
Query Conservation
Alig confidence
Template Conservation
Template Sequence		I	D	R	F	S	K	V	L	M	S	Y	G	F	T	T
Template Known Secondary structure												T	T
Template Predicted Secondary structure
Template SS confidence
		327	.	.	330	.	.	.	.	.	.	.	.	.	340	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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