Job Description P0A9N4 Confidence 89.63% Date Thu Jan 5 11:10:48 GMT 2012 Rank 33 Aligned Residues 67 % Identity 15% Template c3k8kB_ PDB info PDB header:membrane protein Chain: B: PDB Molecule:alpha-amylase, susg; PDBTitle: crystal structure of susg Resolution 2.20 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		177	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	D	D	S	A	H	R	L	G	E	F	T	R	D	M	G	N	V	E	K	I	E	L	L	P	Y	H	E	L	G	K	H	K	W	V	A	M	G	E	E	Y	K	L	D	G	V	K	P	P	K	K	E	T	M	E	R	V	K	G	I	L	E	Q	Y	G	H	K	V	M
Query Conservation
Alig confidence																		.																.
Template Conservation																		.																.
Template Sequence		D	L	N	G	V	T	Q	K	L	D	Y	L	N	Q	L	G	.	V	K	A	L	W	L	S	P	I	H	P	C	X	S	Y	.	H	G	Y	D	V	T	D	Y	T	K	V	N	P	Q	L	G	T	E	S	D	F	D	R	L	V	T	E	A	H	N	R	G	I	K	I	Y
Template Known Secondary structure								T	T							T	T	.		S								S		B	S	S	T	.	T			S	B	S		T	T	S			T	T	T																T	T
Template Predicted Secondary structure																		.																.
Template SS confidence
		81	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.		.	.	.	100	.	.	.	.	.	.	.	.	.	110	.		.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions