Job Description P0A9N4 Confidence 99.88% Date Thu Jan 5 11:10:48 GMT 2012 Rank 3 Aligned Residues 206 % Identity 14% Template c2yx0A_ PDB info PDB header:metal binding protein Chain: A: PDB Molecule:radical sam enzyme; PDBTitle: crystal structure of p. horikoshii tyw1 Resolution 2.21 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		18	.	20	.	.	.	.	.	.	.				.	.	30	.	.	.	.	.	.	.	.	.	40	.				.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.																.	70	.	.	.	.	.	.
Predicted Secondary structure												.	.	.															.	.	.																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence												.	.	.															.	.	.																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		G	P	G	I	R	F	I	T	F	F	.	.	.	Q	G	C	L	M	R	C	L	Y	C	H	N	R	D	.	.	.	T	W	D	T	H	G	G	K	E	V	T	V	E	D	L	M	K	E	V	V	T	Y	R	H	F	M	N	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	A	S	G	G	G	V	T	A
Query Conservation												.	.	.															.	.	.																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence												.	.	.															.	.	.																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		I	H	S	H	R	C	L	Q	M	T	P	V	L	A	W	C	T	H	N	C	I	F	C	W	R	P	M	E	N	F	L	G	T	E	L	P	Q	P	W	D	D	P	A	F	I	V	E	E	S	I	K	A	Q	R	K	L	L	I	G	Y	K	P	K	V	D	K	K	K	F	E	E	A	W	N	P	T	H	A	A	I
Template Known Secondary structure				G	G	G						S		S	S			S	B			T	T				S	S	S	S		S		S	S			S	S																				T	T					S									T	S
Template Predicted Secondary structure
Template SS confidence
		66	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.
		77	.		.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.					.	.	.	.	.	150	.
Predicted Secondary structure				.																																																																			.	.	.	.
Query SS confidence				.																																																																			.	.	.	.
Query Sequence		S	G	.	G	E	A	I	L	Q	A	E	F	V	R	D	W	F	R	A	C	K	K	E	G	I	H	T	C	L	D	T	N	G	F	V	R	R	Y	D	P	V	I	D	E	L	L	E	V	T	D	L	V	M	L	D	L	K	Q	M	N	D	E	I	H	Q	N	L	V	G	.	.	.	.	V	S	N	H	R	T	L
Query Conservation				.																																																																			.	.	.	.
Alig confidence				.									.																																																										.	.	.	.
Template Conservation													.
Template Sequence		S	L	S	G	E	P	M	L	Y	P	Y	.	M	G	D	L	V	E	E	F	H	K	R	G	F	T	T	F	I	V	T	N	G	T	I	P	E	R	L	E	E	M	I	K	E	D	K	L	P	T	Q	L	Y	V	S	I	T	A	P	D	I	E	T	Y	N	S	V	N	I	P	M	I	P	D	G	W	E	R	I	L
Template Known Secondary structure			S	S	S		G	G	G	S	T	T	.											T	T									S												T	T				S									S	S										B	S	S	S
Template Predicted Secondary structure													.
Template SS confidence
		148	.	150	.	.	.	.	.	.	.	.		.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.
		152	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	F	A	K	Y	L	A	N	K	N	V	K	V	W	I	R	Y	V	V	V	P	G	W	S	D	D	D	D	S	A	H	R	L	G	E	F	T	R	D	M	G	N	V	E	K	I	E	L	L	P	Y	H	E	L	G	K	H	K	W	V	A	M	G	E	E	Y	K	L	D	G	V	K	P	P	K	K	E	T	M	E
Query Conservation
Alig confidence																											.	.															.										.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																											.	.															.										.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		R	F	L	E	L	M	R	D	L	P	T	R	T	V	V	R	L	T	L	V	K	G	E	N	M	.	.	H	S	P	E	K	Y	A	K	L	I	L	K	A	R	.	P	M	F	V	E	A	K	A	Y	.	.	.	.	.	.	.	.	.	.	.	.	.	M	N	R	L	T	I	N	N	M	P	S	H	Q	D	I	R
Template Known Secondary structure								T	T		S	S										T	T	T	T		.	.															.		S								.	.	.	.	.	.	.	.	.	.	.	.	.						G	G	G	S
Template Predicted Secondary structure																											.	.															.										.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		227	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.			.	.	.	.	.	.	.	.	260	.	.	.	.	.		.	.	.	.	270	.	.	.	.														.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290
		232	.	.	.	.	.	.	.	240
Predicted Secondary structure
Query SS confidence
Query Sequence		R	V	K	G	I	L	E	Q	Y
Query Conservation
Alig confidence
Template Conservation
Template Sequence		E	F	A	E	A	L	V	K	H
Template Known Secondary structure									T	T
Template Predicted Secondary structure
Template SS confidence
		297	.	.	300	.	.	.	.	.

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions