|   |
1 | . | . | . | . | . | . | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 |
Predicted Secondary structure |   |
|  |  |  |  |  |  |
|
|  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |
|
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
M | S | V | I | G | R | I | H | S | F | E | S | C | G | T | V | D | G | P | G | I | R | F | I | T | F | F | Q | G | C | L | M | R | C | L | Y | C | H | N | R | D | T | W | D | T | H | G | G | K | E | V | T | V | E | D | L | M | K | E | V | V | T | Y | R | H | F | M | N | A | S | G | G | G | V | T | A | S | G | G | E |
Query Conservation |   |
  |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |   |
|
|   |   |
|
|
|   |   |
|   |
|
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |
|
|
|   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |
|
|
|
Alig confidence |   |
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |
|   |   |
|
|   |
|
| . | . | . | . | . | . | . | . |
|   |   |
|
|
|
|   |   |
|   |   |
|
|   |   |
|
|
|
|   |
|   |   |   | . |   |
|   |   |   |   |   |   |   |   |
|   |   |   |   |   |
|   |
|
|   |   | . | . |   |   |
|
|   |
|
|
|
|
|
|
|
|
Template Sequence |   |
S | P | V | P | G | L | T | H | R | . |
. |
. |
. |
. |
. |
. |
. |
Y | P | D | R | V | L | L | L | I | T | D | X | C | S | X | Y | C | R | H | C | T | R | R | R | F | . |
A | G | Q | S | D | D | S | X | P | X | E | R | I | D | K | A | I | D | Y | I | R | N | . |
. |
T | P | Q | V | R | D | V | L | L | S | G | G | D |
Template Known Secondary structure |   |
| S | B | T | T |  |  |
|
| . | . | . | . | . | . | . | . | S | S | S |  |  |  |  |  |  |  | S |
|
| S | S |
|
| T | T |
| T | T | T | T | T | . | T | T | S | S | S | S | B |
|
|  |  |  |  |  |  |  |  |  |  |  |  | T | . | . |
| T | T |
|
|  |  |  |  |  |  | S |
|
Template Predicted Secondary structure |   |
|
|
|
|
|
|  |  |
| . | . | . | . | . | . | . | . |
|
|
|  |  |  |  |  |  |
|
|
|
|
|
|
|  |  |  |
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  | . | . |
|
|
|  |  |  |  |  |  |  |
|
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
104 | . | . | . | . | . | 110 | . | . | |
|
|
|
|
|
|
|
. | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | |
. | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | |
|
160 | . | . | . | . | . | . | . | . | . | 170 | . | . |
  |
  |   |
81 | . | . | . | . | . | |
. | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | |
|
. | . | . | . | . | . | |
|
|
|
|
. | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . |
Predicted Secondary structure |   |
|
|
|
|  |  | . |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
| . | . |
|
|  |  |
|
| . | . | . | . | . |
|
|
|
|
|  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |  |
|
|  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
|
|
|
|
|
| . |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
A | I | L | Q | A | E | . |
F | V | R | D | W | F | R | A | C | K | K | E | G | I | H | . |
. |
T | C | L | D | T | N | . |
. |
. |
. |
. |
G | F | V | R | R | Y | D | P | V | I | D | E | L | L | E | V | T | D | L | V | M | L | D | L | K | Q | M | N | D | E | I | H | Q | N | L | V | G | V | S | N | H | R | T | L | E |
Query Conservation |   |
|
|
|   |   |   | . |   |   |   |   |
|   |   |   |   |   |   |   |   |   |   | . | . |   |   |
|   |
|
| . | . | . | . | . |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
Alig confidence |   |
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
| . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . |
|
|
|
|
|
Template Conservation |   |
|
|   |
|   |   |   |   |
|   |   |
|
|   |   |
|   |   |
|   |
|
|   |   |
|
|
|   |
|
|   |
|
|
|   |
|   |
|
|
|   |
|
|
|   |   |
|   |   |   |   |   |
|   |
|   |   |
|   |
|
|
|   |
|
|
| . | . | . | . | . | . | . | . | . |   |   |   |   |   |
Template Sequence |   |
A | L | L | V | S | D | E | T | L | E | Y | I | I | A | K | L | R | E | I | P | H | V | E | I | V | R | I | G | S | R | T | P | V | V | L | P | Q | R | I | T | P | E | L | V | N | X | L | K | K | Y | H | P | V | W | L | N | T | H | F | N | H | P | N | E | I | T | . |
. |
. |
. |
. |
. |
. |
. |
. |
E | E | S | T | R |
Template Known Secondary structure |   |
T | T | S | S |
|  |  |  |  |  |  |  |  |  |  |  | T | T | S | T | T |
|
|  |  |  |  |  |
| S |  |  |  |  |
| G | G | G |
|
|  |  |  |  |  |  |  |  | T | T |
| S |  |  |  |  |  |
|
|
| S | G | G | G |
|
| . | . | . | . | . | . | . | . | . |  |  |  |  |  |
Template Predicted Secondary structure |   |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |
|
|  |  |  |  |  |  |  |
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
173 | . | . | . | . | . | . | 180 | . | . | . | . | . | . | . | . | . | 190 | . | . | . | . | . | . | . | . | . | 200 | . | . | . | . | . | . | . | . | . | 210 | . | . | . | . | . | . | . | . | . | 220 | . | . | . | . | . | . | . | . | . | 230 | . | . | . | . | . | . | . | . | |
|
|
|
|
|
|
|
|
. | 240 | . | . | . |
  |
  |   |
153 | . | . | . | . | . | . | 160 | . | . | . | . | . | . | . | . | . | 170 | . | . | . | . | . | . | . | . | . | 180 | . | . | . | . | . | . | . | . | . | 190 | . | . | . | . | . | . | . | . | . | 200 | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
F | A | K | Y | L | A | N | K | N | V | K | V | W | I | R | Y | V | V | V | P | G | W | S | D | D | D | D | S | A | H | R | L | G | E | F | T | R | D | M | G | N | V | E | K | I | E | L | L | P | Y | H |
Query Conservation |   |
  |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |   |   |   |   |   |   |
|   |   |
|   |   |   |   |   |   |
|   |   |   |   |   |
|   |   |   |
|   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . |
|
|
|
|
|
Template Conservation |   |
|
|   |   |
|   |   |   |
|
|   |
|   |
|
|
|
|
|
|
|
|
|
|
|
|   |
|   |
|   |   |
|   |   |   |
|   |   |   |
| . | . | . | . | . | . |
|   |
|
|
|
Template Sequence |   |
A | C | Q | L | L | A | D | A | G | V | P | L | G | N | Q | S | V | L | L | R | G | V | N | D | C | V | H | V | X | K | E | L | V | N | K | L | V | K | I | R | . |
. |
. |
. |
. |
. |
V | R | P | Y | Y |
Template Known Secondary structure |   |
 |  |  |  |  |  |  | T | T |
|
|  |  |  |  |  |  |  |
| T | T | T | T |
| S |  |  |  |  |  |  |  |  |  |  |  |  |  | T | T | . | . | . | . | . | . |  |  |  |  |  |
Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
| . | . | . | . | . | . |
|  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
244 | . | . | . | . | . | 250 | . | . | . | . | . | . | . | . | . | 260 | . | . | . | . | . | . | . | . | . | 270 | . | . | . | . | . | . | . | . | . | 280 | . | . | . | |
|
|
|
|
|
. | . | . | . | . |
  |