Job Description P0AGC5 Confidence 96.90% Date Thu Jan 5 11:28:45 GMT 2012 Rank 97 Aligned Residues 197 % Identity 15% Template d2ozza1 SCOP info Periplasmic binding protein-like II Periplasmic binding protein-like II Phosphate binding protein-like Resolution 2.30

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		46	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																																											.	.	.	.	.	.	.
Query SS confidence																																																																											.	.	.	.	.	.	.
Query Sequence		R	V	S	T	I	H	T	P	L	T	Y	N	E	I	N	G	K	P	F	G	L	D	Y	E	L	A	K	Q	F	A	D	Y	L	G	V	K	L	K	V	T	V	R	Q	N	I	S	Q	L	F	D	D	L	D	N	G	N	A	D	L	L	A	A	G	L	V	Y	N	S	E	R	V	K	N	.	.	.	.	.	.	.
Query Conservation																																																																											.	.	.	.	.	.	.
Alig confidence													.	.	.	.	.															.	.	.																													.	.											.	.	.	.	.	.	.
Template Conservation													.	.	.	.	.															.	.	.																													.	.
Template Sequence		V	V	C	A	X	P	L	P	Y	T	R	.	.	.	.	.	L	Y	E	G	L	A	S	G	L	K	A	Q	F	D	.	.	.	G	I	P	F	Y	Y	A	H	X	R	G	A	D	I	R	V	E	C	L	L	N	G	V	Y	D	X	A	V	.	.	V	S	R	L	A	A	E	S	Y	L	S	Q	N	N	L	C	I
Template Known Secondary structure											S		.	.	.	.	.												T	T	T	.	.	.	T	S								S											T	T	S		S				.	.													S
Template Predicted Secondary structure													.	.	.	.	.															.	.	.																													.	.
Template SS confidence
		15	.	.	.	.	20	.	.	.	.	.						.	.	.	.	30	.	.	.	.	.	.	.	.	.				40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.			.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.
			119	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.
Predicted Secondary structure		.
Query SS confidence		.
Query Sequence		.	Y	Q	P	G	P	T	Y	Y	S	V	S	Q	Q	L	V	Y	K	V	G	Q	Y	R	P	R	T	L	G	N	L	T	A	E	Q	L	T	V	A	P	G	H	V	V	V	N	D	L	Q	T	L	K	E	T	K	F	P	E	L	S	W	K	V	D	D	K	K	G	S	A	E	L	M	E	D	V	I	E	G	K	L
Query Conservation		.
Alig confidence		.																									.	.	.	.	.	.	.																							.	.	.	.
Template Conservation																											.	.	.	.	.	.	.																							.	.	.	.
Template Sequence		A	L	E	L	G	P	H	T	Y	V	G	E	H	Q	L	I	C	R	K	G	E	S	G	N	V	.	.	.	.	.	.	.	K	R	V	G	L	D	S	R	S	A	D	Q	K	I	X	T	D	V	F	F	G	D	.	.	.	.	S	D	V	E	R	V	D	L	S	Y	H	E	S	L	Q	R	I	V	K	G	D	V
Template Known Secondary structure							T	T	S	S	S									T	T		G	G	G		.	.	.	.	.	.	.							T	T													T	T	.	.	.	.	S																			T	S
Template Predicted Secondary structure																											.	.	.	.	.	.	.																							.	.	.	.
Template SS confidence
		85	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.								110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.					.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.
		198	.	200	.			.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.
Predicted Secondary structure						.	.
Query SS confidence						.	.
Query Sequence		D	Y	T	I	.	.	A	D	S	V	A	I	S	L	F	Q	R	V	H	P	E	L	A	V	A	L	D	I	T	D	E	Q	P	V	T	W	F	S	P	L	D	G	D	N	T	L	S	A	A	L	L	D	F	F	N	E	M	N	E	D	G	T	L	A	R	I	E	E	K
Query Conservation						.	.
Alig confidence						.	.								.
Template Conservation															.
Template Sequence		D	A	V	I	W	N	V	A	E	N	E	L	T	.	X	L	G	L	E	A	T	P	L	T	D	D	P	R	F	L	Q	A	T	E	A	V	V	L	T	R	V	D	D	Y	P	X	Q	Q	L	L	R	A	V	V	D	K	H	A	L	L	A	H	Q	Q	R	V	V	S	G
Template Known Secondary structure															.		T	T								S							T	T								T	T																										T	T
Template Predicted Secondary structure															.
Template SS confidence
		154	.	.	.	.	.	160	.	.	.	.	.	.		.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions