Job Description P0AGC5 Confidence 94.62% Date Thu Jan 5 11:28:45 GMT 2012 Rank 121 Aligned Residues 85 % Identity 15% Template d2hava1 SCOP info Periplasmic binding protein-like II Periplasmic binding protein-like II Transferrin Resolution 2.70

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		67	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.																.	.	.	130	.
Predicted Secondary structure																																																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		D	Y	E	L	A	K	Q	F	A	D	Y	L	G	V	K	L	K	V	T	V	R	Q	N	I	S	Q	L	F	D	D	L	D	N	G	N	A	D	L	L	A	A	G	L	V	Y	N	S	E	R	V	K	N	Y	Q	P	G	P	T	Y	Y	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S	V	S	Q	Q
Query Conservation																																																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																																																					.									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																					.
Template Sequence		E	R	L	K	C	D	E	W	S	V	N	S	V	G	K	I	E	C	V	S	A	E	T	T	E	D	C	I	A	K	I	M	N	G	E	A	D	A	M	S	L	D	G	G	F	V	Y	I	A	G	K	.	C	G	L	V	P	V	L	A	E	N	Y	N	K	S	D	N	C	E	D	T	P	E	A	G	Y	F	A	V
Template Known Secondary structure														T	T	S							S	S											T	S																	.	T	T										S	S	T	T	S	G	G	G
Template Predicted Secondary structure																																																					.
Template SS confidence
		351	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.		.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.
		132	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	V	Y	K	V	G	Q	Y	R	P	R	T	L	G	N	L	T	A	E	Q	L	T
Query Conservation
Alig confidence										.
Template Conservation										.
Template Sequence		A	V	V	K	K	S	A	S	.	D	L	T	W	D	N	L	K	G	K	K	S	C
Template Known Secondary structure						T	T	S	S	.	S			G	G	G		T	T
Template Predicted Secondary structure										.
Template SS confidence
		430	.	.	.	.	.	.	.		.	.	440	.	.	.	.	.	.	.	.	.	450

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions