Job Description P0AGC5 Confidence 97.84% Date Thu Jan 5 11:28:45 GMT 2012 Rank 75 Aligned Residues 202 % Identity 14% Template d2czla1 SCOP info Periplasmic binding protein-like II Periplasmic binding protein-like II Phosphate binding protein-like Resolution 1.55

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		79	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.				110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.
Predicted Secondary structure																																	.	.	.
Query SS confidence																																	.	.	.
Query Sequence		G	V	K	L	K	V	T	V	R	Q	N	I	S	Q	L	F	D	D	L	D	N	G	N	A	D	L	L	A	A	G	L	.	.	.	V	Y	N	S	E	R	V	K	N	Y	Q	P	G	P	T	Y	Y	S	V	S	Q	Q	L	V	Y	K	V	G	Q	Y	R	P	R	T	L	G	N	L	T	A	E	Q	L	T	V	A
Query Conservation																																	.	.	.
Alig confidence												.																					.	.	.																												.	.	.	.	.
Template Conservation												.																																																			.	.	.	.	.
Template Sequence		P	V	P	L	E	P	V	L	E	D	.	V	E	T	L	N	R	W	A	L	E	G	R	L	P	L	T	K	L	S	Y	A	A	Y	A	Q	V	R	D	R	Y	V	A	L	R	S	G	G	A	L	G	R	G	V	G	P	L	V	V	A	R	.	.	.	.	.	G	P	L	Q	A	L	E	G	L	R	V	A	V	P
Template Known Secondary structure		S	S									.										T	T			S										T	T		T	T	T					S	S	S					S	S								S	.	.	.	.	.	S			S			T	T						S
Template Predicted Secondary structure												.																																																			.	.	.	.	.
Template SS confidence
		29	30	.	.	.	.	.	.	.	.		.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.						.	90	.	.	.	.	.	.	.	.	.	100	.	.
		156	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220								.	.	.	.	.	.	.	.
Predicted Secondary structure																																																																			.	.	.	.	.	.	.
Query SS confidence																																																																			.	.	.	.	.	.	.
Query Sequence		P	G	H	V	V	V	N	D	L	Q	T	L	K	E	T	K	F	P	E	L	S	W	K	V	D	D	K	K	G	S	A	E	L	M	E	D	V	I	E	G	K	L	D	Y	T	I	A	D	S	V	A	I	S	L	F	Q	R	V	H	P	E	L	A	V	A	.	.	.	.	.	.	.	L	D	I	T	D	E	Q	P
Query Conservation																																																																			.	.	.	.	.	.	.
Alig confidence																		.	.	.	.	.	.																																												.	.	.	.	.	.	.
Template Conservation																		.	.	.	.	.	.
Template Sequence		G	R	H	T	T	A	Y	F	L	L	S	L	Y	A	Q	G	.	.	.	.	.	.	F	V	P	V	E	V	R	Y	D	R	I	L	P	M	V	A	Q	G	E	V	E	A	G	L	I	I	H	E	S	R	F	T	Y	P	R	Y	G	L	V	Q	V	V	D	L	G	A	W	W	E	E	R	T	G	L	P	L	P	L
Template Known Secondary structure			T	T	S											S	S	.	.	.	.	.	.								G	G	G							T	T	S	S	S						T	T					G	G	G	G	T																S	S
Template Predicted Secondary structure																		.	.	.	.	.	.
Template SS confidence
		103	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.							.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.
		229	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.						.	.	.	.	260	.	.	.	.	.	.		.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.
Predicted Secondary structure																													.	.	.	.	.												.
Query SS confidence																													.	.	.	.	.												.
Query Sequence		V	T	W	F	S	P	L	D	G	D	N	T	L	S	A	A	L	L	D	F	F	N	E	M	N	E	D	.	.	.	.	.	G	T	L	A	R	I	E	E	K	Y	L	.	G	H	G	D	D	F	D	Y	V	D	T	R	T	F	L	R	A	V	D	A	V	L	P	Q	L	K
Query Conservation																													.	.	.	.	.												.
Alig confidence																													.	.	.	.	.												.
Template Conservation
Template Sequence		G	A	I	L	A	R	R	D	L	G	E	G	L	I	R	A	L	D	E	A	V	R	R	S	V	A	Y	A	L	A	H	P	E	E	A	L	D	Y	M	R	A	H	A	Q	E	L	S	D	E	V	I	W	A	H	V	H	T	Y	V	N	A	F	S	L	D	V	G	E	E	G
Template Known Secondary structure								G	G	G																						S	G	G	G	G									T	T	S														S
Template Predicted Secondary structure
Template SS confidence
		177	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions