Return to main results Retrieve Phyre Job Id

Job DescriptionP0AGC5
Confidence97.86%DateThu Jan 5 11:28:45 GMT 2012
Rank73Aligned Residues164
% Identity12%Templated1zbma1
SCOP infoPeriplasmic binding protein-like II Periplasmic binding protein-like II Phosphate binding protein-like
Resolution2.30

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   78.80.........90.........100.........110.........120.........130.........140. ........150....
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Query Sequence  LGVKLKVTVRQNISQLFDDLDNGNADLLAAGLVYNSERVKNYQPGPTYYSVSQQLVYKVGQYRP. . . RTLGNLTAEQLTV
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Template Sequence  TWLEIEH. VIEDIETLNRKAFNAEYEVTAISA. . . . . . HAYALLDDKYRILSAGASVGDGYGPVVVAKSEISLDGKRIAV
Template Known Secondary structure 
S

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GGGT

S......TTSTTT
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   27..30... ......40.........50....... ..60.........70.........80.........90.........
 
   155....160.........170.........180.........190.........200.........210.........220. .......
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Query Sequence  APGHVVVNDLQTLKETKFPELSWKVDDKKGSAELMEDVIEGKLDYTIADSVAISLFQRVHPELAVAL. . . . . . DITDEQP
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Template Sequence  PGRYTTANLLLKLAVED. . . . . . FEPVEXPFDRIIQAVLDEEVDAGLLIHEGQITYADYGLKCVLDLWDWWSEQVKLPLP
Template Known Secondary structure  S
TTS
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GGGTTSSS
SGGGGTGGGGT
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   100.........110...... ...120.........130.........140.........150.........160.........170...
 
   229230 .........240.........250....
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Query Sequence  VT. WFSPLDGDNTLSAALLDFFNEMNE
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Template Sequence  LGLNAIRRDLSVEVQEEFLRAXRESIA
Template Known Secondary structure  TTS
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   174.....180.........190.........200
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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