Job Description P0AGC5 Confidence 80.19% Date Thu Jan 5 11:28:45 GMT 2012 Rank 170 Aligned Residues 180 % Identity 17% Template d1xvya_ SCOP info Periplasmic binding protein-like II Periplasmic binding protein-like II Phosphate binding protein-like Resolution 1.74

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		69	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.					.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120																							.	.
Predicted Secondary structure																																.	.	.	.																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																.	.	.	.																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		E	L	A	K	Q	F	A	D	Y	L	G	V	K	L	K	V	T	V	R	Q	N	I	S	Q	L	F	D	D	L	D	.	.	.	.	N	G	N	A	D	L	L	A	A	G	L	V	Y	N	S	E	R	V	K	N	Y	Q	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	P	G
Query Conservation																																.	.	.	.																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																						.										.	.	.	.																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																						.
Template Sequence		S	W	V	D	G	F	T	K	D	T	G	I	K	V	T	L	R	N	G	G	.	D	S	E	L	G	N	Q	L	V	Q	E	G	S	A	S	P	A	D	V	F	L	T	E	N	S	P	A	M	V	L	V	D	N	A	K	L	F	A	P	L	D	A	A	T	L	A	Q	V	E	P	Q	Y	R	P	S	H	G	R	W
Template Known Secondary structure																						.												G	G	G				S					S	S	S									T	T		B									T	T	B		G	G	G	S		T	T		S	S
Template Predicted Secondary structure																						.
Template SS confidence
		17	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.		.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.
		123	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140					.	.	.	.	.	.	.						.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170									.	.	.	.	.	.	.	.	.	180	.	.	.	.	.
Predicted Secondary structure																				.	.	.	.								.	.	.	.	.																								.	.	.	.	.	.	.	.
Query SS confidence																				.	.	.	.								.	.	.	.	.																								.	.	.	.	.	.	.	.
Query Sequence		P	T	Y	Y	S	V	S	Q	Q	L	V	Y	K	V	G	Q	Y	R	.	.	.	.	P	R	T	L	G	N	L	.	.	.	.	.	T	A	E	Q	L	T	V	A	P	G	H	V	V	V	N	D	L	Q	T	L	K	E	T	.	.	.	.	.	.	.	.	K	F	P	E	L	S	W	K	V	D	D	K	K	G	S
Query Conservation																				.	.	.	.								.	.	.	.	.																								.	.	.	.	.	.	.	.
Alig confidence																				.	.	.	.								.	.	.	.	.																								.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		I	G	I	A	A	R	S	T	V	F	V	Y	N	P	A	K	L	S	D	A	Q	L	P	K	S	L	L	D	L	A	K	P	E	W	K	G	R	W	A	A	S	P	S	G	A	D	F	Q	A	I	V	S	A	L	L	E	L	K	G	E	K	A	T	L	A	W	L	K	A	M	K	T	N	F	T	A	Y	K	G	N
Template Known Secondary structure															T	T	T	S		G	G	G			S	S	G	G	G	G	G	S	G	G	G	T	T	S					T	T	S																																		S	S
Template Predicted Secondary structure
Template SS confidence
		96	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.
		186	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.										.	.	230	.	.	.	.	.	.		.	.	.	240	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																												.	.	.	.	.	.	.	.	.										.
Query SS confidence																																												.	.	.	.	.	.	.	.	.										.
Query Sequence		A	E	L	M	E	D	V	I	E	G	K	L	D	Y	T	I	A	D	S	V	A	I	S	L	F	Q	R	V	H	P	E	L	A	V	A	L	D	I	T	D	E	Q	.	.	.	.	.	.	.	.	.	P	V	T	W	F	S	P	L	D	.	G	D	N	T	L	S	A	A	L	L	D	F	F
Query Conservation																																												.	.	.	.	.	.	.	.	.										.
Alig confidence																																												.	.	.	.	.	.	.	.	.										.
Template Conservation
Template Sequence		S	T	V	M	K	A	V	N	A	G	Q	V	D	S	G	V	I	Y	H	Y	Y	P	F	V	D	G	A	K	T	G	E	N	S	N	N	I	K	L	Y	Y	F	K	H	Q	D	P	G	A	F	V	S	I	S	G	G	G	V	L	A	S	S	K	H	Q	Q	Q	A	Q	A	F	I	K	W	I
Template Known Secondary structure											T	S	S	S						T									T	T		T	T	T	T	T								T	T		G	G	G										B	T	T		T	T
Template Predicted Secondary structure
Template SS confidence
		176	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions