Job Description P0AGC5 Confidence 99.96% Date Thu Jan 5 11:28:45 GMT 2012 Rank 33 Aligned Residues 225 % Identity 16% Template d1xt8a1 SCOP info Periplasmic binding protein-like II Periplasmic binding protein-like II Phosphate binding protein-like Resolution 2.00

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		34	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.			50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.				.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.
Predicted Secondary structure																		.	.																																	.	.	.
Query SS confidence																		.	.																																	.	.	.
Query Sequence		N	R	I	A	A	I	Q	A	R	G	E	L	R	V	S	T	.	.	I	H	T	P	L	T	Y	N	E	I	N	G	K	P	F	G	L	D	Y	E	L	A	K	Q	F	A	D	Y	L	G	V	K	.	.	.	L	K	V	T	V	R	Q	N	I	S	Q	L	F	D	D	L	D	N	G	N	A	D	L	L	A	A	G
Query Conservation																		.	.																																	.	.	.
Alig confidence																		.	.																																	.	.	.								.
Template Conservation																																																														.
Template Sequence		N	S	L	D	K	I	K	Q	N	G	V	V	R	I	G	V	F	G	D	K	P	P	F	G	Y	V	D	E	K	G	N	N	Q	G	Y	D	I	A	L	A	K	R	I	A	K	E	L	F	G	D	E	N	K	V	Q	F	V	L	V	E	.	A	A	N	R	V	E	F	L	K	S	N	K	V	D	I	I	L	A	N
Template Known Secondary structure											S	S							S			T	T	T					T	T	S				S															S		T	T									.	G	G	G							T	T	S		S				S	S
Template Predicted Secondary structure																																																														.
Template SS confidence
		11	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70		.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.
		109	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	V	Y	N	S	E	R	V	K	N	Y	Q	P	G	P	T	Y	Y	S	V	S	Q	Q	L	V	Y	K	V	G	Q	Y	R	P	R	T	L	G	N	L	T	A	E	Q	L	T	V	A	P	G	H	V	V	V	N	D	L	Q	T	L	K	E	T	K	F	P	E	L	S	W	K	V	D	D	K	K	G	S	A	E	L
Query Conservation
Alig confidence																																	.																														.	.	.	.	.	.
Template Conservation																																	.																														.	.	.	.	.	.
Template Sequence		F	T	Q	T	P	Q	R	A	E	Q	V	D	F	C	S	P	Y	M	K	V	A	L	G	V	A	V	P	K	D	S	N	.	I	T	S	V	E	D	L	K	D	K	T	L	L	L	N	K	G	T	T	A	D	A	Y	F	T	Q	N	Y	P	.	.	.	.	.	.	N	I	K	T	L	K	Y	D	Q	N	T	E	T
Template Known Secondary structure			B							T	T																		T	T			.			S	S	G	G	G	T	T	S						T	T	S											T	.	.	.	.	.	.	T	S						S	S
Template Predicted Secondary structure																																	.																														.	.	.	.	.	.
Template SS confidence
		90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120		.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.							150	.	.	.	.	.	.	.	.	.	160	.	.
		189	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.		220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.
Predicted Secondary structure																																	.
Query SS confidence																																	.
Query Sequence		M	E	D	V	I	E	G	K	L	D	Y	T	I	A	D	S	V	A	I	S	L	F	Q	R	V	H	P	E	L	A	V	.	A	L	D	I	T	D	E	Q	P	V	T	W	F	S	P	L	D	G	D	N	T	L	S	A	A	L	L	D	F	F	N	E	M	N	E	D	G	T	L	A	R	I	E	E	K	Y	L	G
Query Conservation																																	.
Alig confidence																																	.																		.
Template Conservation																																																			.
Template Sequence		F	A	A	L	M	D	K	R	G	D	A	L	S	H	D	N	T	L	L	F	A	W	V	K	D	H	P	D	F	K	M	G	I	K	E	L	G	N	K	D	V	I	A	P	A	V	K	K	G	.	D	K	E	L	K	E	F	I	D	N	L	I	I	K	L	G	Q	E	Q	F	F	H	K	A	Y	D	E	T	L	K
Template Known Secondary structure							T	T	S	S	S																	T	T																				T	T	.																	T	T	T										T	G
Template Predicted Secondary structure																																																			.
Template SS confidence
		163	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.		.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions