Job Description P0AGC5 Confidence 59.90% Date Thu Jan 5 11:28:45 GMT 2012 Rank 188 Aligned Residues 180 % Identity 16% Template d1xc1a_ SCOP info Periplasmic binding protein-like II Periplasmic binding protein-like II Phosphate binding protein-like Resolution 1.51

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		69	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.					100	.	.	.	.	.																									.	.	.	.	110	.	.	.	.	.	.	.	.	.	120
Predicted Secondary structure																																	.	.	.	.							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																	.	.	.	.							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		E	L	A	K	Q	F	A	D	Y	L	G	V	K	L	K	V	T	V	R	Q	N	I	S	Q	L	F	D	D	L	D	N	.	.	.	.	G	N	A	D	L	L	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	A	A	G	L	V	Y	N	S	E	R	V	K	N	Y	Q
Query Conservation																																	.	.	.	.							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																						.											.	.	.	.							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																						.
Template Sequence		A	V	A	D	A	F	T	R	A	T	G	I	K	V	K	L	N	S	A	K	.	G	D	Q	L	A	G	Q	I	K	E	E	G	S	R	S	P	A	D	V	F	Y	S	E	Q	I	P	A	L	A	T	L	S	A	A	N	L	L	E	P	L	P	A	S	T	I	N	E	T	R	G	K	G	V	P	V	A	A	K	K
Template Known Secondary structure																						.										T	T		T	T	S	S		S					S											T	T		B											T			T	T	S				T	T	S
Template Predicted Secondary structure																						.
Template SS confidence
		15	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.		.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.
		121	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140					.	.	.	.	.	.	.						.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.									170	.	.	.	.	.	.	.	.	.	180	.	.	.
Predicted Secondary structure																						.	.	.	.								.	.	.	.	.																							.	.	.	.	.	.	.	.
Query SS confidence																						.	.	.	.								.	.	.	.	.																							.	.	.	.	.	.	.	.
Query Sequence		P	G	P	T	Y	Y	S	V	S	Q	Q	L	V	Y	K	V	G	Q	Y	R	.	.	.	.	P	R	T	L	G	N	L	.	.	.	.	.	T	A	E	Q	L	T	V	A	P	G	H	V	V	V	N	D	L	Q	T	L	K	E	.	.	.	.	.	.	.	.	T	K	F	P	E	L	S	W	K	V	D	D	K	K
Query Conservation																						.	.	.	.								.	.	.	.	.																							.	.	.	.	.	.	.	.
Alig confidence																						.	.	.	.								.	.	.	.	.																							.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		D	W	V	A	L	S	G	R	S	R	V	V	V	Y	D	T	R	K	L	S	E	K	D	L	E	K	S	V	L	N	Y	A	T	P	K	W	K	N	R	I	G	Y	V	P	T	S	G	A	F	L	E	Q	I	V	A	I	V	K	L	K	G	E	A	A	A	L	K	W	L	K	G	L	K	E	Y	G	K	P	Y	A
Template Known Secondary structure																	T	T	T			G	G	G	S		S	S	G	G	G	G	S	S	G	G	G	T	T	T					T	T																															S				S
Template Predicted Secondary structure
Template SS confidence
		94	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.
		184	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.										.	.	.	230	.	.	.	.	.	.		.	.	.	240	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																													.	.	.	.	.	.	.	.	.											.
Query SS confidence																																													.	.	.	.	.	.	.	.	.											.
Query Sequence		G	S	A	E	L	M	E	D	V	I	E	G	K	L	D	Y	T	I	A	D	S	V	A	I	S	L	F	Q	R	V	H	P	E	L	A	V	A	L	D	I	T	D	E	.	.	.	.	.	.	.	.	.	Q	P	V	T	W	F	S	P	L	D	.	G	D	N	T	L	S	A	A	L	L	D	F	F
Query Conservation																																													.	.	.	.	.	.	.	.	.											.
Alig confidence																																													.	.	.	.	.	.	.	.	.											.
Template Conservation
Template Sequence		K	N	S	V	A	L	Q	A	V	E	N	G	E	I	D	A	A	L	I	N	N	Y	Y	W	H	A	F	A	R	E	K	G	V	Q	N	V	H	T	R	L	N	F	V	R	H	R	D	P	G	A	L	V	T	Y	S	G	A	A	V	L	K	S	S	Q	N	K	D	E	A	K	K	F	V	A	F	L
Template Known Secondary structure		S										T	T	S	S	S																		G	G	G										T	T		G	G	G										B	T	T		S
Template Predicted Secondary structure
Template SS confidence
		174	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions