Job Description P0AGC5 Confidence 26.12% Date Thu Jan 5 11:28:45 GMT 2012 Rank 226 Aligned Residues 175 % Identity 14% Template d1ve4a1 SCOP info Periplasmic binding protein-like II Periplasmic binding protein-like II Phosphate binding protein-like Resolution 1.20

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		63	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80													.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130
Predicted Secondary structure																				.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																				.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		P	F	G	L	D	Y	E	L	A	K	Q	F	A	D	Y	L	G	V	.	.	.	.	.	.	.	.	.	.	.	.	K	L	K	V	T	V	R	Q	N	I	S	Q	L	F	D	D	L	D	N	G	N	A	D	L	L	A	A	G	L	V	Y	N	S	E	R	V	K	N	Y	Q	P	G	P	T	Y	Y	S	V	S	Q
Query Conservation																				.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																				.	.	.	.	.	.	.	.	.	.	.	.										.
Template Conservation																																									.
Template Sequence		P	K	G	R	M	F	R	E	A	Y	E	V	L	K	R	A	G	L	D	L	P	E	V	L	L	H	G	K	E	G	G	V	A	L	L	E	L	R	N	.	K	D	V	P	I	Y	V	D	L	G	I	A	E	I	G	V	V	G	K	D	V	L	L	D	S	G	R	D	L	F	E	P	V	D	L	G	F	G	A	C
Template Known Secondary structure				S	T	T											T	T												T	T	S								G	.	G	G							T	T	S	S	S														S											S
Template Predicted Secondary structure																																									.
Template SS confidence
		11	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.		50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.
		131	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	L	V	Y	K	V	G	Q	Y	R	P	R	T	L	G	N	L	T	A	E	Q	L	T	V	A	P	G	H	V	V	V	N	D	L	Q	T	L	K	E	T	K	F	P	E	L	S	W	K	V	D	D	K	K	G	S	A	E	L	M	E	D	V	I	E	G	K	L	D	Y	T	I	A	D	S	V	A	I	S	L	F
Query Conservation
Alig confidence											.	.	.	.	.										.	.	.	.															.	.																.	.
Template Conservation											.	.	.	.	.										.	.	.	.															.	.																.	.
Template Sequence		R	L	S	L	I	R	R	P	G	.	.	.	.	.	D	T	G	P	I	R	R	V	A	.	.	.	.	T	K	Y	P	N	F	T	A	R	L	L	K	E	R	.	.	G	W	A	A	D	V	V	E	L	S	G	N	I	E	L	.	.	A	A	V	T	G	L	A	D	A	V	V	D	V	V	Q	T	G	A	T	L
Template Known Secondary structure									T	T	.	.	.	.	.			S							.	.	.	.		S												T	.	.	T									S	S		T			.	.				T	T	S	S	S							S	S	S
Template Predicted Secondary structure											.	.	.	.	.										.	.	.	.															.	.																.	.
Template SS confidence
		95	.	.	.	.	100	.	.	.						.	.	.	.	.	.	110	.	.					.	.	.	.	.	.	.	120	.	.	.	.	.	.			.	.	.	130	.	.	.	.	.	.	.	.	.	140	.			.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.
		211	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	R	V	H	P	E	L	A	V	A	L	D	I	T	D	E	Q	P	V	T	W	F	S	P	L	D	G	D	N	T	L	S	A	A	L	L	D	F	F	N	E	M	N	E
Query Conservation
Alig confidence					.	.											.
Template Conservation					.	.											.
Template Sequence		R	A	A	.	.	G	L	V	E	V	E	V	L	A	H	.	S	T	A	R	L	V	V	N	R	Q	A	L	K	L	K	R	A	V	L	K	P	L	I	Q	R	L	R	E
Template Known Secondary structure				T	.	.	T										.															T
Template Predicted Secondary structure					.	.											.
Template SS confidence
		162	.	.			.	.	.	.	.	170	.	.	.	.		.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions