Job Description P0AGC5 Confidence 96.52% Date Thu Jan 5 11:28:45 GMT 2012 Rank 105 Aligned Residues 207 % Identity 9% Template d1utha_ SCOP info Periplasmic binding protein-like II Periplasmic binding protein-like II Phosphate binding protein-like Resolution 2.2

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		32	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.		.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110
Predicted Secondary structure																																																	.
Query SS confidence																																																	.
Query Sequence		A	D	N	R	I	A	A	I	Q	A	R	G	E	L	R	V	S	T	I	H	T	P	L	T	Y	N	E	I	N	G	K	P	F	G	L	D	Y	E	L	A	K	Q	F	A	D	Y	L	.	G	V	K	L	K	V	T	V	R	Q	N	I	S	Q	L	F	D	D	L	D	N	G	N	A	D	L	L	A	A	G	L	V
Query Conservation																																																	.
Alig confidence																										.	.	.	.	.	.	.	.	.															.											.
Template Conservation																										.	.	.	.	.	.	.	.	.																										.
Template Sequence		T	R	N	S	F	D	P	F	A	S	T	R	T	F	N	L	A	M	T	D	I	G	E	M	.	.	.	.	.	.	.	.	.	Y	F	M	P	P	L	M	E	A	L	A	Q	R	A	P	H	I	Q	I	S	T	L	R	P	N	.	A	G	N	L	K	E	D	M	E	S	G	A	V	D	L	A	L	G	L	L	P
Template Known Secondary structure				S	S			T	T	T																.	.	.	.	.	.	.	.	.															T	T								T	T	.	S	S									T	S									T
Template Predicted Secondary structure																										.	.	.	.	.	.	.	.	.																										.
Template SS confidence
		86	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.										110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.		.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.
		111	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.				140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.
Predicted Secondary structure																															.	.	.
Query SS confidence																															.	.	.
Query Sequence		Y	N	S	E	R	V	K	N	Y	Q	P	G	P	T	Y	Y	S	V	S	Q	Q	L	V	Y	K	V	G	Q	Y	.	.	.	R	P	R	T	L	G	N	L	T	A	E	Q	L	T	V	A	P	G	H	V	V	V	N	D	L	Q	T	L	K	E	T	K	F	P	E	L	S	W	K	V	D	D	K	K	G	S	A	E
Query Conservation																															.	.	.
Alig confidence				.	.	.	.																								.	.	.
Template Conservation				.	.	.	.
Template Sequence		E	L	.	.	.	.	Q	T	G	F	F	Q	R	R	L	F	R	H	R	Y	V	C	M	F	R	K	D	H	P	S	A	K	S	P	M	S	L	K	Q	F	S	E	L	E	H	V	G	V	V	A	L	N	T	G	H	G	E	V	D	G	L	L	E	R	A	G	I	K	R	R	M	R	L	V	V	P	H	F	I	A
Template Known Secondary structure		T		.	.	.	.		T	T																	T	T		S	S			S	S									S								T	T	S	G	G	G	G								T	T										S	S	S	T	T
Template Predicted Secondary structure				.	.	.	.
Template SS confidence
		156	.					.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.
		188	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.		.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.
Predicted Secondary structure																																																			.
Query SS confidence																																																			.
Query Sequence		L	M	E	D	V	I	E	G	K	L	D	Y	T	I	A	D	S	V	A	I	S	L	F	Q	R	V	H	P	E	L	A	V	A	L	D	I	T	D	E	Q	P	V	T	W	F	S	P	L	D	.	G	D	N	T	L	S	A	A	L	L	D	F	F	N	E	M
Query Conservation																																																			.
Alig confidence																																																			.
Template Conservation
Template Sequence		I	G	P	I	L	H	S	T	D	L	I	A	T	V	P	Q	R	F	A	V	R	C	E	V	P	F	G	L	T	T	S	P	H	P	A	K	L	P	D	I	A	I	N	L	F	W	H	A	K	Y	N	R	D	P	G	N	M	W	L	R	Q	L	F	V	E	L
Template Known Secondary structure								T	S	S		B												T	T	T	T	T							S	S													G	G	G	T	T
Template Predicted Secondary structure
Template SS confidence
		232	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions