Job Description P0AGC5 Confidence 93.51% Date Thu Jan 5 11:28:45 GMT 2012 Rank 129 Aligned Residues 187 % Identity 16% Template d1sbpa_ SCOP info Periplasmic binding protein-like II Periplasmic binding protein-like II Phosphate binding protein-like Resolution 1.70

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		69	70	.	.	.	.	.	.	.					.	.	80	.	.	.	.	.	.	.	.		.	90	.	.	.	.	.	.	.	.	.	100		.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.												.	.	.	.	.	130	.
Predicted Secondary structure											.	.	.	.												.													.																									.	.	.	.	.	.	.	.	.	.	.
Query SS confidence											.	.	.	.												.													.																									.	.	.	.	.	.	.	.	.	.	.
Query Sequence		E	L	A	K	Q	F	A	D	Y	.	.	.	.	L	G	V	K	L	K	V	T	V	R	Q	.	N	I	S	Q	L	F	D	D	L	D	N	G	.	N	A	D	L	L	A	A	G	L	V	Y	N	S	E	R	V	K	N	Y	Q	P	G	P	T	.	.	.	.	.	.	.	.	.	.	.	Y	Y	S	V	S	Q	Q
Query Conservation											.	.	.	.												.													.																									.	.	.	.	.	.	.	.	.	.	.
Alig confidence											.	.	.	.												.													.																									.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		Q	Y	N	K	A	F	S	A	H	W	K	Q	E	T	G	D	N	V	V	I	D	Q	S	H	G	G	S	G	K	Q	A	T	S	V	I	N	G	I	E	A	D	T	V	T	L	A	L	A	Y	D	V	N	A	I	A	E	R	G	R	I	D	K	N	W	I	K	R	L	P	D	D	S	A	P	Y	T	S	T	I	V
Template Known Secondary structure																S										S											T	T				S					S	S										T	T	S	S		T	T	G	G	G	G	S						S			B
Template Predicted Secondary structure
Template SS confidence
		19	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.
		132	.	.	.	.	.	.	.		140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.																												.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.
Predicted Secondary structure										.																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence										.																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		L	V	Y	K	V	G	Q	Y	.	R	P	R	T	L	G	N	L	T	A	E	Q	L	T	V	A	P	G	H	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	V	V	V	N	D	L	Q	T	L	K	E	T	K	F	P	E	L	S	W	K	V	D	D	K	K
Query Conservation										.																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence										.																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.												.	.	.	.	.	.
Template Conservation																																																																				.	.	.	.	.	.
Template Sequence		F	L	V	R	K	G	N	P	K	Q	I	H	D	W	N	D	L	I	K	P	G	V	S	V	I	T	P	N	P	K	S	S	G	G	A	R	W	N	Y	L	A	A	W	G	Y	A	L	H	H	N	N	N	D	Q	A	K	A	E	D	F	V	K	A	L	F	K	.	.	.	.	.	.	N	V	E	V	L	D	S	G
Template Known Secondary structure						T	T		T	T				S	G	G	G	G	G	S	T	T								T	T	T																			T	T	T															.	.	.	.	.	.	T						S	S
Template Predicted Secondary structure																																																																				.	.	.	.	.	.
Template SS confidence
		99	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.							.	.	.	.	.	170	.	.
		184	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.									.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.
Predicted Secondary structure																																																			.	.	.	.	.	.	.	.
Query SS confidence																																																			.	.	.	.	.	.	.	.
Query Sequence		G	S	A	E	L	M	E	D	V	I	E	G	K	L	D	Y	T	I	A	D	S	V	A	I	S	L	F	Q	R	V	H	P	E	L	A	V	A	L	D	I	T	D	E	Q	P	V	T	W	F	.	.	.	.	.	.	.	.	S	P	L	D	G	D	N	T	L	S	A	A	L	L	D	F	F	N	E	M	N	E	D
Query Conservation																																																			.	.	.	.	.	.	.	.
Alig confidence																																																			.	.	.	.	.	.	.	.																		.	.	.	.
Template Conservation																																																																												.	.	.	.
Template Sequence		A	R	G	S	T	N	T	F	V	E	R	G	I	G	D	V	L	I	A	W	E	N	E	A	L	L	A	T	N	E	L	G	K	D	K	F	E	I	V	T	P	S	E	S	I	L	A	E	P	T	V	S	V	V	D	K	V	V	E	K	K	D	T	K	A	V	A	E	A	Y	L	K	Y	L	.	.	.	.	Y	S
Template Known Secondary structure											T	S				S															T	T	T	T	T	T							S					B															T											G	G	.	.	.	.	G	S
Template Predicted Secondary structure																																																																												.	.	.	.
Template SS confidence
		173	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.					.	.
		256	.	.	.	260	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	T	L	A	R	I	E	E	K	Y
Query Conservation
Alig confidence
Template Conservation
Template Sequence		P	E	G	Q	E	I	A	A	K	N
Template Known Secondary structure											T
Template Predicted Secondary structure
Template SS confidence
		249	250	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions