Job Description P0AGC5 Confidence 48.53% Date Thu Jan 5 11:28:45 GMT 2012 Rank 201 Aligned Residues 83 % Identity 10% Template d1dota2 SCOP info Periplasmic binding protein-like II Periplasmic binding protein-like II Transferrin Resolution 2.35

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		67	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.																	.	130
Predicted Secondary structure																																																																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		D	Y	E	L	A	K	Q	F	A	D	Y	L	G	V	K	L	K	V	T	V	R	Q	N	I	S	Q	L	F	D	D	L	D	N	G	N	A	D	L	L	A	A	G	L	V	Y	N	S	E	R	V	K	N	Y	Q	P	G	P	T	Y	Y	S	V	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S	Q
Query Conservation																																																																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																																																					.											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																					.
Template Sequence		E	K	S	K	C	D	R	W	S	V	V	S	N	G	E	V	E	C	T	I	L	D	D	N	K	D	C	I	V	K	I	T	K	G	E	A	D	A	I	S	L	D	G	G	F	V	Y	T	A	G	V	.	C	G	L	V	P	V	V	G	E	S	Y	E	D	E	T	Q	C	S	K	D	E	E	Q	P	A	Y	Y	F
Template Known Secondary structure														T	S	S							S	S	S									T	T	S			B													T	.	T	T									S		T	T	S	S	S	S	S	S		S	S
Template Predicted Secondary structure																																																					.
Template SS confidence
		354	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.		.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.
		131	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	L	V	Y	K	V	G	Q	Y	R	P	R	T	L	G	N	L	T	A	E	Q
Query Conservation
Alig confidence													.
Template Conservation													.
Template Sequence		A	V	A	V	V	K	K	S	S	A	I	.	T	W	N	N	L	Q	G	K	K
Template Known Secondary structure								S		S			.		G	G	G		T	T
Template Predicted Secondary structure													.
Template SS confidence
		433	.	.	.	.	.	.	440	.	.	.		.	.	.	.	.	.	450	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions