Job Description P0AGC5 Confidence 97.61% Date Thu Jan 5 11:28:45 GMT 2012 Rank 85 Aligned Residues 195 % Identity 14% Template d1atga_ SCOP info Periplasmic binding protein-like II Periplasmic binding protein-like II Phosphate binding protein-like Resolution 1.20

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		69	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100		.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120						.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.
Predicted Secondary structure																																		.																					.	.	.	.	.
Query SS confidence																																		.																					.	.	.	.	.
Query Sequence		E	L	A	K	Q	F	A	D	Y	L	G	V	K	L	K	V	T	V	R	Q	N	I	S	Q	L	F	D	D	L	D	N	G	.	N	A	D	L	L	A	A	G	L	V	Y	N	S	E	R	V	K	N	Y	Q	.	.	.	.	.	P	G	P	T	Y	Y	S	V	S	Q	Q	L	V	Y	K	V	G	Q	Y	R	P	R
Query Conservation																																		.																					.	.	.	.	.
Alig confidence																						.												.																					.	.	.	.	.
Template Conservation																						.
Template Sequence		Q	L	A	G	Q	F	A	K	Q	T	G	H	A	V	V	I	S	S	G	S	.	S	G	P	V	Y	A	Q	I	V	N	G	A	P	Y	N	V	F	F	S	A	D	E	K	S	P	E	K	L	D	N	Q	G	F	A	L	P	G	S	R	F	T	Y	A	I	G	K	L	V	L	W	S	A	K	P	G	L	V	D	N
Template Known Secondary structure																						.										T	T				S					S	S	S									T	T		B		T	T															S	S	T	T	T	S		T
Template Predicted Secondary structure																						.
Template SS confidence
		17	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.		.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.
		143	.	.	.	.				.	.	150	.	.	.	.	.	.							.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.
Predicted Secondary structure							.	.	.										.	.	.	.	.	.
Query SS confidence							.	.	.										.	.	.	.	.	.
Query Sequence		T	L	G	N	L	.	.	.	T	A	E	Q	L	T	V	A	P	.	.	.	.	.	.	G	H	V	V	V	N	D	L	Q	T	L	K	E	T	K	F	P	E	L	S	W	K	V	D	D	K	K	G	S	A	E	L	M	E	D	V	I	E	G	K	L	D	Y	T	I	A	D	S	V	A	I	S	L	F	Q	R	V
Query Conservation							.	.	.										.	.	.	.	.	.
Alig confidence							.	.	.										.	.	.	.	.	.
Template Conservation
Template Sequence		Q	G	K	V	L	A	G	N	G	W	R	H	I	A	I	S	N	P	Q	I	A	P	Y	G	L	A	G	T	Q	V	L	T	H	L	G	L	L	D	K	L	T	A	Q	E	R	I	V	E	A	N	S	V	G	Q	A	H	S	Q	T	A	S	G	A	A	D	L	G	F	V	A	L	A	Q	I	I	Q	A	A	A	K
Template Known Secondary structure		T	S	G	G	G	G	S	S	S		S							T	T	T														T	T								T	T						S	S										T	T	S	S	S						G	G	G	T			T	T	S
Template Predicted Secondary structure
Template SS confidence
		96	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.
		214	.	.	.	.	.	220	.	.	.	.	.	.	.	.			.	230	.	.	.	.	.	.	.	.		.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																	.	.											.
Query SS confidence																	.	.											.
Query Sequence		H	P	E	L	A	V	A	L	D	I	T	D	E	Q	P	.	.	V	T	W	F	S	P	L	D	G	D	.	N	T	L	S	A	A	L	L	D	F	F	N	E	M	N	E	D	G	T	L	A	R	I	E	E	K	Y	L	G	H	G
Query Conservation																	.	.											.
Alig confidence																	.	.											.												.	.	.	.													.
Template Conservation																																									.	.	.	.													.
Template Sequence		I	P	G	S	H	W	F	P	P	A	N	Y	Y	E	P	I	V	Q	Q	A	V	I	T	K	S	T	A	E	K	A	N	A	E	Q	F	M	S	W	M	.	.	.	.	K	G	P	K	A	V	A	I	I	K	A	A	.	G	Y	V
Template Known Secondary structure			S	S							G	G	G	S										B	T	T		S												T	.	.	.	.	T	S										T	.	T		B
Template Predicted Secondary structure																																									.	.	.	.													.
Template SS confidence
		176	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.					.	.	.	.	.	220	.	.	.	.	.	.		.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions