Job Description P0AGC5 Confidence 97.77% Date Thu Jan 5 11:28:45 GMT 2012 Rank 77 Aligned Residues 208 % Identity 17% Template d1amfa_ SCOP info Periplasmic binding protein-like II Periplasmic binding protein-like II Phosphate binding protein-like Resolution 1.75

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		43	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.		.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.
Predicted Secondary structure																																																													.
Query SS confidence																																																													.
Query Sequence		G	E	L	R	V	S	T	I	H	T	P	L	T	Y	N	E	I	N	G	K	P	F	G	L	D	Y	E	L	A	K	Q	F	A	D	Y	L	G	V	K	L	K	V	T	V	R	Q	N	I	S	Q	L	F	D	D	L	D	N	G	N	.	A	D	L	L	A	A	G	L	V	Y	N	S	E	R	V	K	N	Y	Q	P
Query Conservation																																																													.
Alig confidence											.	.	.	.	.	.	.	.	.	.																												.													.
Template Conservation											.	.	.	.	.	.	.	.	.	.																												.
Template Sequence		G	K	I	T	V	F	A	A	A	.	.	.	.	.	.	.	.	.	.	S	L	T	N	A	M	Q	D	I	A	T	Q	F	K	K	E	K	G	V	D	V	V	S	S	F	A	S	.	S	S	T	L	A	R	Q	I	E	A	G	A	P	A	D	L	F	I	S	A	D	Q	K	W	M	D	Y	A	V	D	K	K	A
Template Known Secondary structure										G	.	.	.	.	.	.	.	.	.	.	G	G																										.											T				S					S	S										T	T
Template Predicted Secondary structure											.	.	.	.	.	.	.	.	.	.																												.
Template SS confidence
		3	.	.	.	.	.	.	10	.											.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.		.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.
		122	.	.	.	.	.						.	.	130	.	.	.	.	.	.	.	.	.	140					.	.	.	.	.	.	.						.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.				.	.	.	.	.	.	180	.	.	.	.
Predicted Secondary structure								.	.	.	.	.														.	.	.	.								.	.	.	.	.																											.	.	.
Query SS confidence								.	.	.	.	.														.	.	.	.								.	.	.	.	.																											.	.	.
Query Sequence		G	P	T	Y	Y	S	.	.	.	.	.	V	S	Q	Q	L	V	Y	K	V	G	Q	Y	R	.	.	.	.	P	R	T	L	G	N	L	.	.	.	.	.	T	A	E	Q	L	T	V	A	P	G	H	V	V	V	N	D	L	Q	T	L	K	E	T	K	F	P	.	.	.	E	L	S	W	K	V	D	D	K	K	G
Query Conservation								.	.	.	.	.														.	.	.	.								.	.	.	.	.																											.	.	.
Alig confidence								.	.	.	.	.														.	.	.	.								.	.	.	.	.																											.	.	.
Template Conservation
Template Sequence		I	D	T	A	T	R	Q	T	L	L	G	N	S	L	V	V	V	A	P	K	A	S	V	Q	K	D	F	T	I	D	S	K	T	N	W	T	S	L	L	N	G	G	R	L	A	V	G	D	P	E	H	V	P	A	G	I	Y	A	K	E	A	L	Q	K	L	G	A	W	D	T	L	S	P	K	L	A	P	A	E	D
Template Known Secondary structure		B		G	G	G															T	T									S	T	T								T	T								T	T	T														T	T						G	G	G					S	S
Template Predicted Secondary structure
Template SS confidence
		72	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.
		185	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	A	E	L	M	E	D	V	I	E	G	K	L	D	Y	T	I	A	D	S	V	A	I	S	L	F	Q	R	V	H	P	E	L	A	V	A	L	D	I	T	D	E	Q	P	V	T	W	F	S	P	L	D	G	D	N	T	L	S	A	A	L	L	D	F	F	N	E	M	N	E	D	G	T	L	A	R	I	E	E	K
Query Conservation
Alig confidence																																																																			.	.	.	.
Template Conservation																																																																			.	.	.	.
Template Sequence		V	R	G	A	L	A	L	V	E	R	N	E	A	P	L	G	I	V	Y	G	S	D	A	V	A	S	K	G	V	K	V	V	A	T	F	P	E	D	S	H	K	K	V	E	Y	P	V	A	V	V	E	G	H	N	N	A	T	V	K	A	F	Y	D	Y	L	.	.	.	.	K	G	P	Q	A	A	E	I	F	K	R
Template Known Secondary structure											T	T	S	S	S													S	S									G	G	G	S										B	T	T			S											.	.	.	.	T	S
Template Predicted Secondary structure																																																																			.	.	.	.
Template SS confidence
		152	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.					.	.	.	220	.	.	.	.	.	.	.
		265
Predicted Secondary structure
Query SS confidence
Query Sequence		Y
Query Conservation
Alig confidence
Template Conservation
Template Sequence		Y
Template Known Secondary structure		T
Template Predicted Secondary structure
Template SS confidence
		228

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions