Job Description P0AGC5 Confidence 47.65% Date Thu Jan 5 11:28:45 GMT 2012 Rank 204 Aligned Residues 52 % Identity 27% Template c3utkA_ PDB info PDB header:protein transport Chain: A: PDB Molecule:lipoprotein outs; PDBTitle: structure of the pilotin of the type ii secretion system Resolution 1.65 Å

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		352	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.		410	.	.	.	.	.	.	.	.	.	420	.	.	.
Predicted Secondary structure																																																												.
Query SS confidence																																																												.
Query Sequence		S	I	S	G	G	V	R	Y	L	Q	D	M	M	S	K	V	P	E	S	V	P	E	N	E	R	I	W	F	A	L	A	A	Y	N	M	G	Y	A	H	M	L	D	A	R	A	L	T	A	K	T	K	G	N	P	D	S	W	A	.	D	V	K	Q	R	L	P	L	L	S	Q	K	P	Y
Query Conservation																																																												.
Alig confidence																	.	.										.	.	.	.	.	.	.	.	.	.	.	.	.													.	.	.	.	.			.
Template Conservation																	.	.										.	.	.	.	.	.	.	.	.	.	.	.	.													.	.	.	.	.
Template Sequence		S	L	V	A	A	S	K	Y	L	R	V	Q	C	E	R	.	.	S	D	L	P	D	D	G	T	I	.	.	.	.	.	.	.	.	.	.	.	.	.	L	K	T	A	V	N	V	A	V	Q	K	G	.	.	.	.	.	W	D	T	G	R	Y	Q	S	L	P	Q	L	S	E	N	L	Y
Template Known Secondary structure														S			.	.	T	T	S							.	.	.	.	.	.	.	.	.	.	.	.	.											T	T	.	.	.	.	.			T	T	S		T	T	S
Template Predicted Secondary structure																	.	.										.	.	.	.	.	.	.	.	.	.	.	.	.													.	.	.	.	.
Template SS confidence
		49	50	.	.	.	.	.	.	.	.	.	60	.	.	.			.	.	.	.	.	.	70	.	.														.	.	.	.	.	.	.	80	.	.	.	.						.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions