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Job DescriptionP0AGC5
Confidence98.87%DateThu Jan 5 11:28:45 GMT 2012
Rank52Aligned Residues218
% Identity11%Templatec3un6A_
PDB info PDB header:unknown functionChain: A: PDB Molecule:hypothetical protein saouhsc_00137; PDBTitle: 2.0 angstrom crystal structure of ligand binding component of abc-type2 import system from staphylococcus aureus with zinc bound
Resolution2.01 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   42.......50.........60.........70. ........80.........90.........100.........110... ....
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Query Sequence  RGELRVSTIHTPLTYNEINGKPFGLDYELA. KQFADYLGVKLKVTVRQNISQLFDDLDNGNADLLAAGLVYNS. . . ERVK
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Template Sequence  QQVIKIGYLPITHSA. . . . . . . . NLXXTKKLLSQYNHPKYKLELVKFNNWPDLXDALNSGRIDGASTLIELAXKSKQKGS
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SSGGG........TSSS
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   34.....40........ .50.........60.........70.........80.........90.........100.....
 
   118.120.........130.........140.........150..... ....160.........170.........180.........190......
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Query Sequence  NYQPGPTYYSVSQQLVYKVGQYRPRTLGNLTAEQLTVA. PGHVVVNDLQTLKETKFPELSWKVDDKKGSAELMEDVIEGK
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Template Sequence  NIKAVALGHHEGNVIXGQKGXHLNEFNNNGDDYHFGIPHRYSTHYLLLEELRKQLKIKPGHFSYHEXSPAEXPAALSEHR
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S

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S
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   106...110.........120.........130.........140.........150.........160.........170.........180.....
 
   197..200.........210...... ...220.........230...... .. .240.........250.........260......
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Query Sequence  LDYTIADSVAISLFQRVHPE. . LAVALDITDEQPVTWFSPLD. . . . . GD. . . NTLSAALLDFFNEMNEDGTLARIEEKYL
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Template Sequence  ITGYSVAEPFGALGEKLGKGKTLKHGDDVIPDAYCCVLVLRGELLDQHKDVAQAFVQDYKKSGFKXNDRKQSVDIXTHHF
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   186...190.........200.........210.........220.........230.........240.........250.........260.....
 
   267
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Query Sequence  G
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Template Sequence  K
Template Known Secondary structure  S
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   266
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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