Return to main results Retrieve Phyre Job Id

Job DescriptionP0AGC5
Confidence99.09%DateThu Jan 5 11:28:45 GMT 2012
Rank47Aligned Residues211
% Identity8%Templatec3uifA_
PDB info PDB header:transport proteinChain: A: PDB Molecule:sulfonate abc transporter, periplasmic sulfonate-binding PDBTitle: crystal structure of putative sulfonate abc transporter, periplasmic2 sulfonate-binding protein ssua from methylobacillus flagellatus kt
Resolution2.60 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


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Query Sequence  ELRVST. IHTPLTYNEINGKPFGLDYELAKQFADYLGVKLKVTVRQ. . . NISQLFDDLDNGNADLLAAGLVYNS. . . ERV
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Template Sequence  VVRIASVATNVGGKTVYAGSASLVVNGAFPEELRKQGIKVEWVPAAXASVGPVINEGFASGKIDFGIYGDLPPIILNASK
Template Known Secondary structure  TT
TSSTT
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   2930.........40.........50.........60.........70.........80.........90.........100........
 
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Query Sequence  KNYQPGPTYYSVSQQLVYKVGQYRPRTLGNLTAEQLTVAPGHVVVNDLQTLKETKFPELSWKVDDKKGSAELMEDVIEGK
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Template Sequence  PTVQLVAPWGTTSNSYLVVPKNSTAKSIKDLKGKKIALHRGRPWELAFSNLLQSEGLTFKDFKIVNVNPQVGAAALASGT
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   109110.........120.........130.........140.........150.........160.........170.........180........
 
   197..200.........210.........220......... 230..... ....240.........250....
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Query Sequence  LDYTIADSVAISLFQRVHPELAVALDITDEQPV. . TWFSPL. . . . DGDNTLSAALLDFFNEMNE
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Template Sequence  VDGFFSLFDSYILEDRGVGKIIWSTKTAPVDWKLXGGVWARNDFVKQNPEITQAIVTAYLKSVH
Template Known Secondary structure  SSSTTTTSGGGS
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   189190.........200.........210.........220.........230.........240.........250..
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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