Job Description P0AGC5 Confidence 98.71% Date Thu Jan 5 11:28:45 GMT 2012 Rank 58 Aligned Residues 204 % Identity 14% Template c3tqwA_ PDB info PDB header:transport protein Chain: A: PDB Molecule:methionine-binding protein; PDBTitle: structure of a abc transporter, periplasmic substrate-binding protein2 from coxiella burnetii Resolution 2.00 Å

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		44	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.						.	110	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																																			.	.	.	.	.
Query SS confidence																																																																			.	.	.	.	.
Query Sequence		E	L	R	V	S	T	I	H	T	P	L	T	Y	N	E	I	N	G	K	P	F	G	L	D	Y	E	L	A	K	Q	F	A	D	Y	L	G	V	K	L	K	V	T	V	R	Q	N	I	S	Q	L	F	D	D	L	D	N	G	N	A	D	L	L	A	A	G	.	.	.	.	.	L	V	Y	N	S	E	R	V	K	N
Query Conservation																																																																			.	.	.	.	.
Alig confidence														.	.	.	.	.	.	.	.	.																																													.	.	.	.	.
Template Conservation														.	.	.	.	.	.	.	.	.
Template Sequence		X	V	R	V	G	T	I	A	G	P	E	T	.	.	.	.	.	.	.	.	.	Q	L	X	E	V	A	K	Q	V	A	L	N	R	Y	G	L	H	V	N	I	I	T	F	S	D	Y	N	T	P	N	E	A	L	A	D	G	S	V	D	A	N	X	F	Q	H	L	P	Y	L	K	A	Q	I	E	X	R	G	Y	K
Template Known Secondary structure									T	T				.	.	.	.	.	.	.	.	.																								S		T	T	S							T	T	S		S
Template Predicted Secondary structure														.	.	.	.	.	.	.	.	.
Template SS confidence
		1	.	.	.	.	.	.	.	.	10	.	.										.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.
		119	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.		.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.																		.	.	.	.	.	.	.	180
Predicted Secondary structure																																.																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																.																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		Y	Q	P	G	P	T	Y	Y	S	V	S	Q	Q	L	V	Y	K	V	G	Q	Y	R	P	R	T	L	G	N	L	T	.	A	E	Q	L	T	V	A	P	G	H	V	V	V	N	D	L	Q	T	L	K	E	T	K	F	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	P	E	L	S	W	K	V	D
Query Conservation																																.																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																				.	.	.	.									.																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																				.	.	.	.
Template Sequence		I	V	S	I	G	K	T	F	V	Y	P	X	G	L	Y	S	K	K	.	.	.	.	I	T	A	L	T	Q	L	K	T	G	A	K	I	A	V	P	S	D	P	S	N	E	A	R	A	L	L	L	L	E	K	A	Q	L	I	Q	L	K	T	H	I	N	A	T	P	X	D	I	A	S	N	P	K	K	L	K	I	V
Template Known Secondary structure																		S	S	.	.	.	.		S	S	G	G	G			T	T								S														T	T	S											G	G	G					T	T
Template Predicted Secondary structure																				.	.	.	.
Template SS confidence
		72	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.					90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.
		181	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.		.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.		.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.
Predicted Secondary structure																																					.																						.
Query SS confidence																																					.																						.
Query Sequence		D	K	K	G	S	A	E	L	M	E	D	V	I	E	G	K	L	D	Y	T	I	A	D	S	V	A	I	S	L	F	Q	R	V	H	P	.	E	L	A	V	A	L	D	I	T	D	E	Q	P	V	T	W	F	S	P	L	D	.	G	D	N	T	L	S	A	A	L	L	D	F	F	N	E	M	N	E	D	G	T	L
Query Conservation																																					.																						.
Alig confidence													.	.	.																						.																						.														.	.	.	.
Template Conservation													.	.	.																																																										.	.	.	.
Template Sequence		E	L	D	A	A	Q	L	S	R	S	L	.	.	.	G	D	V	D	L	A	A	I	N	T	N	Y	A	I	P	A	G	L	S	P	S	R	D	A	L	L	T	E	G	P	N	S	P	Y	A	N	V	V	A	V	R	E	D	D	K	N	D	P	R	L	K	Q	L	V	S	A	L	.	.	.	.	H	S	P	A	V
Template Known Secondary structure					G	G	G	G	G	G		T	.	.	.	T	T		S										G	G	G	T			T	T	T	T		S					S	S	S	S									G	G	G	T	T												.	.	.	.	T	S
Template Predicted Secondary structure													.	.	.																																																										.	.	.	.
Template SS confidence
		150	.	.	.	.	.	.	.	.	.	160				.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.					.	.	220	.	.
		259	260	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	R	I	E	E	K	Y	L	G
Query Conservation
Alig confidence
Template Conservation
Template Sequence		L	S	A	A	K	K	I	F	G
Template Known Secondary structure										G
Template Predicted Secondary structure
Template SS confidence
		223	.	.	.	.	.	.	230	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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