Return to main results Retrieve Phyre Job Id

Job DescriptionP0AGC5
Confidence58.73%DateThu Jan 5 11:28:45 GMT 2012
Rank190Aligned Residues40
% Identity15%Templatec3lvuB_
PDB info PDB header:transport proteinChain: B: PDB Molecule:abc transporter, periplasmic substrate-binding protein; PDBTitle: crystal structure of abc transporter, periplasmic substrate-binding2 protein spo2066 from silicibacter pomeroyi
Resolution1.79 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   68.70.........80.........90.........100........
Predicted Secondary structure 













Query SS confidence 








































Query Sequence  YELAKQFADYLGVKLKVTVRQNISQLFDDLDNGNADLLAAG
Query Conservation   

   

  


 


        

  
  

 


 
 
Alig confidence 




















.


















Template Conservation 
  
   
   

 
 
    .             
     
Template Sequence  LEIYTRALERLGIAAQIEKVD. NAQYTARVAELDFDLTPFR
Template Known Secondary structure  TT



.TT

S
Template Predicted Secondary structure 






.




Template SS confidence 








































   455....460.........470..... ....480.........490....
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions