Job Description P0AGC5 Confidence 99.95% Date Thu Jan 5 11:28:45 GMT 2012 Rank 38 Aligned Residues 138 % Identity 19% Template c3gxkB_ PDB info PDB header:hydrolase Chain: B: PDB Molecule:goose-type lysozyme 1; PDBTitle: the crystal structure of g-type lysozyme from atlantic cod2 (gadus morhua l.) in complex with nag oligomers sheds new3 light on substrate binding and the catalytic mechanism.4 native structure to 1.9 Resolution 1.90 Å

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		277	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.			.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.									.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.
Predicted Secondary structure																											.	.																									.	.	.	.	.	.	.	.
Query SS confidence																											.	.																									.	.	.	.	.	.	.	.
Query Sequence		T	R	T	F	L	R	A	V	D	A	V	L	P	Q	L	K	P	L	F	E	K	Y	A	E	E	.	.	I	D	W	R	L	L	A	A	I	A	Y	Q	E	S	H	W	D	A	Q	A	T	S	P	T	.	.	.	.	.	.	.	.	G	V	R	G	M	M	M	L	T	K	N	T	A	Q	S	L	G	I	T	D	R
Query Conservation																											.	.																									.	.	.	.	.	.	.	.
Alig confidence																											.	.																									.	.	.	.	.	.	.	.																		.	.	.
Template Conservation																																																																														.	.	.
Template Sequence		S	H	T	M	A	Q	T	D	A	G	R	M	E	K	Y	K	S	F	I	N	N	V	A	K	K	H	V	V	D	P	A	V	I	A	A	I	I	S	R	E	S	R	A	G	N	V	I	F	N	T	T	P	P	G	W	G	D	N	Y	N	G	F	G	L	M	Q	V	D	K	R	Y	H	E	P	R	G	.	.	.	A
Template Known Secondary structure														G	G	G												T															G	G	G	T	T	T	T	T	S	S	S	T	T			T	T	T	T			T	T	T	T			T	T	T	S				S	.	.	.
Template Predicted Secondary structure																																																																														.	.	.
Template SS confidence
		34	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.				110
		347	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.				.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.
Predicted Secondary structure																							.	.	.
Query SS confidence																							.	.	.
Query Sequence		T	D	A	E	Q	S	I	S	G	G	V	R	Y	L	Q	D	M	M	S	K	V	.	.	.	P	E	S	V	P	E	N	E	R	I	W	F	A	L	A	A	Y	N	M	G	Y	A	H	M	L	D	A	R	A	L	T	A	K	T	K	G	N	P	D	S	W	A	D	V	K	Q	R	L	P	L	L	S	Q	K	P	Y
Query Conservation																							.	.	.
Alig confidence																							.	.	.																												.	.	.	.	.	.								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																					.	.	.	.	.	.								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		W	N	S	E	E	H	I	D	Q	A	T	G	I	L	V	N	F	I	Q	L	I	Q	K	K	F	P	S	W	S	T	E	Q	Q	L	K	G	A	I	A	A	Y	N	T	G	D	G	R	V	E	S	Y	.	.	.	.	.	.	E	S	V	D	S	R	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure		T	T	S																							T	T	S																	G	G	G				S	.	.	.	.	.	.	T	T	T	T	T	T	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																																					.	.	.	.	.	.								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		111	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.							.	.	.	.	.	.	.
		424	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Y	S	K	L	T	Y	G	Y	A	R	G	H	E	A	Y	A	Y	V	E	N	I	R	K	Y	Q	I	S	L
Query Conservation
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	.	T	G	K	D	Y	S	N	D	V	V	A	R	A	Q	W	Y
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	G	G	G
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
														169	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions