Job Description P0AGC5 Confidence 97.66% Date Thu Jan 5 11:28:45 GMT 2012 Rank 79 Aligned Residues 252 % Identity 10% Template c3fxbB_ PDB info PDB header:transport protein Chain: B: PDB Molecule:trap dicarboxylate transporter, dctp subunit; PDBTitle: crystal structure of the ectoine-binding protein ueha Resolution 2.90 Å

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		44	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.				.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120
Predicted Secondary structure																																													.	.	.
Query SS confidence																																													.	.	.
Query Sequence		E	L	R	V	S	T	I	H	T	P	L	T	Y	N	E	I	N	G	K	P	F	G	L	D	Y	E	L	A	K	Q	F	A	D	Y	L	G	V	K	L	K	V	T	V	.	.	.	R	Q	N	I	S	Q	L	F	D	D	L	D	N	G	N	A	D	L	L	A	A	G	L	V	Y	N	S	E	R	V	K	N	Y	Q
Query Conservation																																													.	.	.
Alig confidence																.	.	.	.	.	.																								.	.	.
Template Conservation																.	.	.	.	.	.
Template Sequence		T	W	R	Y	A	F	E	E	A	M	T	D	V	Q	.	.	.	.	.	.	G	V	Y	A	Q	K	F	K	E	E	I	E	A	N	S	D	H	E	I	Q	L	F	P	Y	G	T	L	G	E	S	A	D	I	M	E	Q	T	Q	D	G	I	L	Q	F	V	D	Q	S	P	G	F	T	G	S	L	I	P	E	A	Q
Template Known Secondary structure								S	S		S	S	S			.	.	.	.	.	.														S	S	S								T	T	S	S		S											T	S		S										T	T	T	S	G	G	G	G
Template Predicted Secondary structure																.	.	.	.	.	.
Template SS confidence
		2	.	.	.	.	.	.	.	10	.	.	.	.	.							.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.
			121	.	.	.	.	.	.	.	.	130																																				.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.
Predicted Secondary structure		.											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence		.											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		.	P	G	P	T	Y	Y	S	V	S	Q	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	Q	L	V	Y	K	V	G	Q	Y	R	P	R	T	L	G	N	L	T	A	E	Q	L	T	V	A	P	G	H	V	V	V	N	D	L
Query Conservation		.											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		V	F	F	V	P	Y	L	L	P	T	D	Q	D	H	L	A	R	F	F	K	E	S	K	A	I	N	D	M	F	K	P	L	Y	A	D	Q	G	L	E	L	L	N	M	F	P	E	G	E	V	A	M	T	T	K	T	P	V	T	T	C	S	D	L	D	E	V	K	F	R	V	M	T	N	P	L	L	V	E	S	Y
Template Known Secondary structure		G	G	G	S	T	T		S		S																	T	T	S						T	T	T																	S	S			S	S	G	G	G	S	T	T							S
Template Predicted Secondary structure
Template SS confidence
		76	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.
		165	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.						.	.	.	.
Predicted Secondary structure																																																																									.	.	.	.	.
Query SS confidence																																																																									.	.	.	.	.
Query Sequence		Q	T	L	K	E	T	K	F	P	E	L	S	W	K	V	D	D	K	K	G	S	A	E	L	M	E	D	V	I	E	G	K	L	D	Y	T	I	A	D	S	V	A	I	S	L	F	Q	R	V	H	P	E	L	A	V	A	L	D	I	T	D	E	Q	P	V	T	W	F	S	P	L	.	.	.	.	.	D	G	D	N
Query Conservation																																																																									.	.	.	.	.
Alig confidence							.	.	.	.	.	.	.	.	.																														.																												.	.	.	.	.
Template Conservation							.	.	.	.	.	.	.	.	.																														.
Template Sequence		K	A	F	G	A	.	.	.	.	.	.	.	.	.	T	P	T	P	L	P	W	G	E	V	Y	G	G	L	Q	T	N	V	I	Q	G	Q	E	N	P	T	F	F	L	.	Y	S	T	K	I	Y	E	V	T	D	Y	I	T	Y	A	G	H	N	N	F	T	T	A	V	M	A	N	K	D	F	Y	D	G	L	S	A
Template Known Secondary structure					T	S	.	.	.	.	.	.	.	.	.							G	G	G							T	T	S												.			T	T	G	G	G	S																										S
Template Predicted Secondary structure							.	.	.	.	.	.	.	.	.																														.
Template SS confidence
		156	.	.	.	160										.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.		190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.
		240	.	.	.	.	.	.	.	.	.	250	.	.	.											.	.	.	.	.	.	260	.	.	.	.	.	.	.		.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.
Predicted Secondary structure																.	.	.	.	.	.	.	.	.	.															.
Query SS confidence																.	.	.	.	.	.	.	.	.	.															.
Query Sequence		T	L	S	A	A	L	L	D	F	F	N	E	M	N	.	.	.	.	.	.	.	.	.	.	E	D	G	T	L	A	R	I	E	E	K	Y	L	G	.	H	G	D	D	F	D	Y	V	D	T	R	T	F	L	R	A	V	D	A	V	L	P	Q	L	K	P	L	F	E	K	Y	A	E	E	I	D	W	R	L	L	A
Query Conservation																.	.	.	.	.	.	.	.	.	.															.
Alig confidence																.	.	.	.	.	.	.	.	.	.															.
Template Conservation
Template Sequence		E	D	Q	Q	L	V	Q	N	A	A	L	A	A	Y	D	H	T	V	V	Y	Q	Q	Q	A	A	D	T	E	L	A	K	I	M	E	A	K	P	E	M	Q	V	T	V	L	T	D	E	Q	R	S	C	F	K	E	A	A	A	E	V	E	A	K	F	I	E	M	T	G	D	S	G	A	A	I	L	K	Q	M	K	A
Template Known Secondary structure																											T	T										T	T
Template Predicted Secondary structure
Template SS confidence
		226	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.
		309	310	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	I	A
Query Conservation
Alig confidence
Template Conservation
Template Sequence		D	L	A
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		306	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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