Job Description P0AGC5 Confidence 95.42% Date Thu Jan 5 11:28:45 GMT 2012 Rank 113 Aligned Residues 191 % Identity 12% Template c3fj7A_ PDB info PDB header:protein binding Chain: A: PDB Molecule:major antigenic peptide peb3; PDBTitle: crystal structure of l-phospholactate bound peb3 Resolution 1.70 Å

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		69	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.							.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.		140	.
Predicted Secondary structure																																																							.	.	.	.	.	.																			.
Query SS confidence																																																							.	.	.	.	.	.																			.
Query Sequence		E	L	A	K	Q	F	A	D	Y	L	G	V	K	L	K	V	T	V	R	Q	N	I	S	Q	L	F	D	D	L	D	N	G	N	A	D	L	L	A	A	G	L	V	Y	N	S	E	R	V	K	N	Y	Q	P	.	.	.	.	.	.	G	P	T	Y	Y	S	V	S	Q	Q	L	V	Y	K	V	G	Q	Y	.	R	P
Query Conservation																																																							.	.	.	.	.	.																			.
Alig confidence																							.																																.	.	.	.	.	.																			.
Template Conservation																							.
Template Sequence		D	I	A	N	K	Y	S	E	K	T	G	V	K	V	N	V	N	F	G	P	Q	.	A	T	W	F	E	K	A	K	K	D	A	D	I	L	F	G	A	S	D	Q	S	A	L	A	I	A	S	D	F	G	K	D	F	N	V	S	K	I	K	P	L	Y	F	R	E	A	I	I	L	T	Q	K	G	N	P	L	K	I
Template Known Secondary structure																				S		G	.	G	G	T									S					S	S										T	T	G	G	G	S		G	G	G														S	T	T		T	T
Template Predicted Secondary structure																							.
Template SS confidence
		36	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.		.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.
		142	.	.	.	.	.			.	.	150	.	.	.	.							.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.						.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.
Predicted Secondary structure								.	.								.	.	.	.	.	.																						.	.	.	.	.
Query SS confidence								.	.								.	.	.	.	.	.																						.	.	.	.	.
Query Sequence		R	T	L	G	N	L	.	.	T	A	E	Q	L	T	V	.	.	.	.	.	.	A	P	G	H	V	V	V	N	D	L	Q	T	L	K	E	T	K	F	P	E	L	.	.	.	.	.	S	W	K	V	D	D	K	K	G	S	A	E	L	M	E	D	V	I	E	G	K	L	D	Y	T	I	A	D	S	V	A	I	S
Query Conservation								.	.								.	.	.	.	.	.																						.	.	.	.	.
Alig confidence								.	.								.	.	.	.	.	.																						.	.	.	.	.
Template Conservation
Template Sequence		K	G	L	K	D	L	A	N	K	K	V	R	I	V	V	P	E	G	A	G	K	S	N	T	S	G	T	G	V	W	E	D	M	I	G	R	T	Q	D	I	K	T	I	Q	N	F	R	N	N	I	V	A	F	V	P	N	S	G	S	A	R	K	L	F	A	Q	D	Q	A	D	A	W	I	T	W	I	D	W	S	K
Template Known Secondary structure			S							S										T	T	S	S			T	T	T	T							G	G	G												T						S	S										T	T			S
Template Predicted Secondary structure
Template SS confidence
		115	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.
		209	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	F	Q	R	V	H	P	E	L	A	V	A	L	D	I	T	D	E	Q	P	V	T	W	F	S	P	L	D	G	D	N	T	L	S	A	A	L	L	D	F	F	N	E	M	N	E	D	G	T	L	A	R	I	E	E	K	Y
Query Conservation
Alig confidence																																	.															.	.	.	.
Template Conservation																																	.															.	.	.	.
Template Sequence		S	N	P	D	I	G	T	A	V	A	I	E	K	D	L	V	V	Y	R	T	F	N	V	I	A	K	E	G	A	S	K	.	E	T	Q	D	F	I	A	Y	L	S	S	K	E	A	.	.	.	.	K	E	I	F	K	K	Y
Template Known Secondary structure				T	T	S								T	T	T												T	T				.									T	T	S				.	.	.	.							T
Template Predicted Secondary structure																																	.															.	.	.	.
Template SS confidence
		195	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.		.	.	.	.	230	.	.	.	.	.	.	.	.	.					240	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions