Job Description P0AGC5 Confidence 96.45% Date Thu Jan 5 11:28:45 GMT 2012 Rank 107 Aligned Residues 188 % Identity 13% Template c3eq1A_ PDB info PDB header:transferase Chain: A: PDB Molecule:porphobilinogen deaminase; PDBTitle: the crystal structure of human porphobilinogen deaminase at2 2.8a resolution Resolution 2.80 Å

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		43	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.		.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.			110	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																						.																																.	.
Query SS confidence																																						.																																.	.
Query Sequence		G	E	L	R	V	S	T	I	H	T	P	L	T	Y	N	E	I	N	G	K	P	F	G	L	D	Y	E	L	A	K	Q	F	A	D	Y	L	.	G	V	K	L	K	V	T	V	R	Q	N	I	S	Q	L	F	D	D	L	D	N	G	N	A	D	L	L	A	A	G	L	.	.	V	Y	N	S	E	R	V	K	N	Y
Query Conservation																																						.																																.	.
Alig confidence																				.	.	.	.	.	.	.	.											.											.	.																				.	.
Template Conservation																				.	.	.	.	.	.	.	.																						.	.
Template Sequence		R	V	I	R	V	G	T	R	K	S	Q	L	A	R	I	Q	T	D	.	.	.	.	.	.	.	.	S	V	V	A	T	L	K	A	S	Y	P	G	L	Q	F	E	I	I	A	F	T	.	.	K	E	L	E	H	A	L	E	K	N	E	V	D	L	V	V	H	S	L	K	D	L	P	T	V	L	P	P	G	F	T
Template Known Secondary structure										S	S									.	.	.	.	.	.	.	.										S	T	T										.	.									T	T	S		S						G	G	G	S		S	S			T	T
Template Predicted Secondary structure																				.	.	.	.	.	.	.	.																						.	.
Template SS confidence
		19	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.									.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.			.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.
		120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.		.	.	.	.	.	.
Predicted Secondary structure																																																																											.
Query SS confidence																																																																											.
Query Sequence		Q	P	G	P	T	Y	Y	S	V	S	Q	Q	L	V	Y	K	V	G	Q	Y	R	P	R	T	L	G	N	L	T	A	E	Q	L	T	V	A	P	G	H	V	V	V	N	D	L	Q	T	L	K	E	T	K	F	P	E	L	S	W	K	V	D	D	K	K	G	S	A	E	L	M	E	D	V	.	I	E	G	K	L	D
Query Conservation																																																																											.
Alig confidence																																																		.	.	.	.												.										.
Template Conservation																																																		.	.	.	.												.
Template Sequence		I	G	A	I	C	K	R	E	N	P	H	D	A	V	V	F	H	P	K	F	V	G	K	T	L	E	T	L	P	E	K	S	V	V	G	T	S	S	L	R	R	A	A	Q	L	Q	R	K	.	.	.	.	F	P	H	L	E	F	R	S	I	Q	G	.	N	L	N	T	R	L	R	K	L	D	E	Q	Q	E	F	S
Template Known Secondary structure																			G	G	G	T	T			G	G	G	S		T	T																		.	.	.	.		T	T	S							S	.											T	S	S	S		S
Template Predicted Secondary structure																																																		.	.	.	.												.
Template SS confidence
		110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.					.	.	160	.	.	.	.	.	.	.	.		.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.
		199	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220					.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.
Predicted Secondary structure																								.	.	.	.
Query SS confidence																								.	.	.	.
Query Sequence		Y	T	I	A	D	S	V	A	I	S	L	F	Q	R	V	H	P	E	L	A	V	A	.	.	.	.	L	D	I	T	D	E	Q	P	V	T	W	F	S	P	L	D	G	D	N	T	L	S	A	A	L
Query Conservation																								.	.	.	.
Alig confidence																								.	.	.	.
Template Conservation
Template Sequence		A	I	I	L	A	T	A	G	L	Q	R	M	G	W	H	N	R	V	G	Q	I	L	H	P	E	E	C	M	Y	A	V	G	Q	G	A	L	G	V	E	V	R	A	K	D	Q	D	I	L	D	L	V
Template Known Secondary structure														T		G	G	G							T	T	T			B		T	T	T	T								T	T
Template Predicted Secondary structure
Template SS confidence
		185	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions