Return to main results Retrieve Phyre Job Id

Job DescriptionP0AGC5
Confidence94.33%DateThu Jan 5 11:28:45 GMT 2012
Rank124Aligned Residues83
% Identity16%Templatec3chgB_
PDB info PDB header:ligand binding proteinChain: B: PDB Molecule:glycine betaine-binding protein; PDBTitle: the compatible solute-binding protein opuac from bacillus2 subtilis in complex with dmsa
Resolution2.80 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   66...70.........80.........90.........100........ .110.... .....120.........130........
Predicted Secondary structure 













.



......









Query SS confidence 










































.





. . . . . .























Query Sequence  LDYELAKQFADYLGVKLKVTVRQNISQLFDDLDNGNADLLAAG. LVYNSE. . . . . . RVKNYQPGPTYYSVSQQLVYKVGQ
Query Conservation   
 

   

  


 


        

  
  

 


 
 .

 
 
......
     

 

      

     
Alig confidence 






















.


















.





......























Template Conservation    
 
   


 


 

     .       

 



     
 
           
 
  

    

  
  

 

Template Sequence  ASTNVIGKVLEDLGYEVTLTQVE. AGPMWTAIATGSADASLSAWLPNTHKAYAAKYKGKYDDIGTSMTGVKMGLVVPQYM
Template Known Secondary structure  TTT


.TTTTSSSTTTTT
TT



TT
Template Predicted Secondary structure 




.




















Template SS confidence 















































































   183......190.........200..... ....210.........220.........230.........240.........250.........260.
 
   139140.........
Predicted Secondary structure 






Query SS confidence 










Query Sequence  YRPRTLGNLTA
Query Conservation    
  
 

 
Alig confidence 










Template Conservation   

 

 



Template Sequence  KNVNSIEDLKK
Template Known Secondary structure  TT

BTGGGT
Template Predicted Secondary structure 






Template SS confidence 










   262.......270..
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions