Job Description P0AGC5 Confidence 93.83% Date Thu Jan 5 11:28:45 GMT 2012 Rank 128 Aligned Residues 188 % Identity 14% Template c2ypnA_ PDB info PDB header:transferase Chain: A: PDB Molecule:protein (hydroxymethylbilane synthase); PDBTitle: hydroxymethylbilane synthase Resolution 2.30 Å

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		42	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.		.	80	.	.	.	.	.	.	.	.			.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.				.	.	.	.	110	.	.	.	.	.
Predicted Secondary structure																																							.											.	.																		.	.	.
Query SS confidence																																							.											.	.																		.	.	.
Query Sequence		R	G	E	L	R	V	S	T	I	H	T	P	L	T	Y	N	E	I	N	G	K	P	F	G	L	D	Y	E	L	A	K	Q	F	A	D	Y	L	.	G	V	K	L	K	V	T	V	R	Q	.	.	N	I	S	Q	L	F	D	D	L	D	N	G	N	A	D	L	L	.	.	.	A	A	G	L	V	Y	N	S	E	R
Query Conservation																																							.											.	.																		.	.	.
Alig confidence																					.	.	.	.	.	.	.	.											.											.	.																		.	.	.
Template Conservation																					.	.	.	.	.	.	.	.
Template Sequence		D	N	V	L	R	I	A	T	R	Q	S	P	L	A	L	W	Q	A	H	.	.	.	.	.	.	.	.	Y	V	K	D	K	L	M	A	S	H	P	G	L	V	V	E	L	V	P	M	V	G	L	F	V	K	E	L	E	V	A	L	L	E	N	R	A	D	I	A	V	H	S	M	K	D	V	P	V	E	F	P	Q
Template Known Secondary structure												S									.	.	.	.	.	.	.	.											T	T																						T	T	S		S						G	G	G	S		S				T
Template Predicted Secondary structure																					.	.	.	.	.	.	.	.
Template SS confidence
		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.									.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.
		116	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	K	N	Y	Q	P	G	P	T	Y	Y	S	V	S	Q	Q	L	V	Y	K	V	G	Q	Y	R	P	R	T	L	G	N	L	T	A	E	Q	L	T	V	A	P	G	H	V	V	V	N	D	L	Q	T	L	K	E	T	K	F	P	E	L	S	W	K	V	D	D	K	K	G	S	A	E	L	M	E	D	V	I	E	G
Query Conservation
Alig confidence																								.	.	.	.																											.	.	.	.												.
Template Conservation																								.	.	.	.																											.	.	.	.												.
Template Sequence		G	L	G	L	V	T	I	C	E	R	E	D	P	R	D	A	F	V	S	N	N	Y	.	.	.	.	D	S	L	D	A	L	P	A	G	S	I	V	G	T	S	S	L	R	R	Q	C	Q	L	A	E	R	.	.	.	.	R	P	D	L	I	I	R	S	L	R	G	.	N	V	G	T	R	L	S	K	L	D	N	G
Template Known Secondary structure		T																			S	S		.	.	.	.	S	S	S	T	T			T	T																		.	.	.	.		T	T	S							S	.											T	T
Template Predicted Secondary structure																								.	.	.	.																											.	.	.	.												.
Template SS confidence
		92	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.					.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.					140	.	.	.	.	.	.	.	.	.	150		.	.	.	.	.	.	.	.	.	160	.	.
		196	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.						.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.
Predicted Secondary structure																																.	.	.	.	.
Query SS confidence																																.	.	.	.	.
Query Sequence		K	L	D	Y	T	I	A	D	S	V	A	I	S	L	F	Q	R	V	H	P	E	L	A	V	A	L	D	I	T	D	.	.	.	.	.	E	Q	P	V	T	W	F	S	P	L	D	G	D	N	T	L	S	A	A	L	L	D
Query Conservation																																.	.	.	.	.
Alig confidence															.																	.	.	.	.	.
Template Conservation															.
Template Sequence		E	Y	D	A	I	I	L	A	V	A	G	L	K	.	R	L	G	L	E	S	R	I	R	A	A	L	P	P	E	I	S	L	P	A	V	G	Q	G	A	V	G	I	E	C	R	L	D	D	S	R	T	R	E	L	L	A	A
Template Known Secondary structure		S		S											.		T	T		G	G	G							T	T	T	S				T	T	T	T								T	T									G	G
Template Predicted Secondary structure															.
Template SS confidence
		163	.	.	.	.	.	.	170	.	.	.	.	.		.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions