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Job DescriptionP0AGC5
Confidence100.00%DateThu Jan 5 11:28:45 GMT 2012
Rank7Aligned Residues236
% Identity15%Templatec2ieeB_
PDB info PDB header:structural genomics, unknown functionChain: B: PDB Molecule:probable abc transporter extracellular-binding PDBTitle: crystal structure of yckb_bacsu from bacillus subtilis.2 northeast structural genomics consortium target sr574.
Resolution2.20 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


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Query Sequence  IAAIQARGELRVST. . IHTPLTYNEINGKPFGLDYELAKQFADYLGVKLKVTVRQNISQLFDDLDNGNADLLAAGLVYNS
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Template Sequence  WEQIKDKGKIVVATSGTLYPTSYHD. TDKLTGYEVEVVREAAKRLGLKVEFKEXG. IDGXLTAVNSGQVDAAANDIDVTK
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   14.....20.........30........ .40.........50.........60....... ..70.........80.........90.
 
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Query Sequence  ERVKNYQPGPTYYSVSQQLVYKVGQYRPRTLGNLTAEQLTVAPGHVVVNDLQTLKETKFPELSWKVDDKKGSAELMEDVI
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Template Sequence  DREEKFAFSTPYKYSYGTAIVRKDDLSGIKTLKDLKGKKAAGATTVYXEVARKYGA. . . . . . KEVIYDNATNEQYLKDVA
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   96...100.........110.........120.........130.........140.........150. ........160.........
 
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Query Sequence  EGKLDYTIADSVAISLFQRVHP. . . ELAVALDITDEQPVTWFSPLDGDNTLSAALLDFFNEMNEDGTLARIEEKYLGHGD
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Template Sequence  NGRTDVILNDYYLQTLALAAFPDLNITIHPDIKYXPNKQALVXKK. SNAALQKKXNEALKEXSKDGSLTKLSKQFFNKAD
Template Known Secondary structure  TTS


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   171........180.........190.........200.........210..... ....220.........230.........240.........
 
   271........280
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Query Sequence  DFDYVDTRTF
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Template Sequence  VSKKIDADVQ
Template Known Secondary structure  TTS


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   250.........
 
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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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