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Job DescriptionP0AGC5
Confidence97.27%DateThu Jan 5 11:28:45 GMT 2012
Rank91Aligned Residues192
% Identity15%Templatec2hxrA_
PDB info PDB header:transcriptionChain: A: PDB Molecule:hth-type transcriptional regulator cynr; PDBTitle: structure of the ligand binding domain of e. coli cynr, a2 transcriptional regulator controlling cyanate metabolism
Resolution2.05 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   44.....50.........60.........70........ .80.........90.........100.........110.........120..
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Query Sequence  ELRVSTIHTPLTYNEINGKPFGLDYELAKQFADYL. GVKLKVTVRQNISQLFDDLDNGNADLLAAGLVYNSERVKNYQPG
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Template Sequence  SLRIAVTPTFTS. . . . . . . . . YFIGPLXADFYARYPSITLQLQEXS. QEKIEDXLCRDELDVGIAFAPVHSPE. . . . LEA
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   92.......100... ......110.........120........ .130.........140.........150.... ...
 
   123......130......... 140.........150.........160.........170.........180.........190........
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Query Sequence  PTYYSVSQQLVYKVGQY. . . . RPRTLGNLTAEQLTVAPGHVVVNDLQTLKETKFPELSWKVDDKKGSAELMEDVIEGKLD
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Template Sequence  IPLLTESLALVVAQHHPLAVHEQVALSRLHDEKLVLLSAEFATREQIDHYCEKAGLHPQVVIEANSISAVLELIRRTSLS
Template Known Secondary structure  TTSGGGG
S
GGGGGG

TTSTT


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   158.160.........170.........180.........190.........200.........210.........220.........230.......
 
   199200.........210.........220.........230.........240.........250....
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Query Sequence  YTIADSVAISLFQRVHPELAVALDITDEQPVTWFSPLDGDNTLSAALLDFFNEMNE
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Template Sequence  TLLPAAIATQH. . . . . DGLKAISLAPPLLERTAVLLRRKNSWQTAAAKAFLHXALD
Template Known Secondary structure  T
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   238.240........ .250.........260.........270.........280........
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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